Gene EcHS_A2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2486 
Symbol 
ID5593692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2492195 
End bp2492683 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID640921607 
Producthypothetical protein 
Protein accessionYP_001459141 
Protein GI157161823 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TCCTGCTCCT TTTACTGTGC GCTGGTTGCG GGGCTGTGCT GGCGGCGGAA 
GATGACATCA CATTCCACGG TACGCTGATG TCGCCGCCCG CCTGTAGCAT CAGCGGCGGG
CAAACCATCG AAGTGCAATT TCGCGATCTC ATTATCGACA GCATTGACGG CAATTATGGT
CGTCAGGAAG TGGACTACGA ACTGAGCTGT GAGTCTGATG TCCGCGATCC CGAGTGGAAT
ATGACACTCT CATGGACGGG GACTGCCACC TCCTACAACG ACTCTGCTAT TGAGACGGAT
GTACCGGGCT TCGGAATTGA GCTTCAGCAT GACGGTCAGC GTTTTAAGCT CAACGAGCCG
CTTTCCATTA ACGCCACCGA TTTTAGCCAG AAGCCAAAGC TGGAGGCGGT ACCGGTCAAA
GCGGCTGATG CGGTGCTGAC GGACACGACC TTTTCTGCTT ACGCAACCTT ACGGGTGGAT
TACCAATGA
 
Protein sequence
MKKFLLLLLC AGCGAVLAAE DDITFHGTLM SPPACSISGG QTIEVQFRDL IIDSIDGNYG 
RQEVDYELSC ESDVRDPEWN MTLSWTGTAT SYNDSAIETD VPGFGIELQH DGQRFKLNEP
LSINATDFSQ KPKLEAVPVK AADAVLTDTT FSAYATLRVD YQ