| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2482 |
|---|
| Symbol | prmB |
|---|
| ID | 5592683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2489079 |
|---|
| End bp | 2490011 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640921603 |
|---|
| Product | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase |
|---|
| Protein accession | YP_001459137 |
|---|
| Protein GI | 157161819 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAAAA TTTTCGTTGA TGAAGCAGTA AATGAGCTGC AAACCATTCA GGACATGTTG
CGCTGGTCGG TGAGCCGCTT CAGCGCGGCG AATATCTGGT ACGGCCACGG CACTGACAAC
CCGTGGGATG AAGCCGTGCA ACTGGTGTTG CCTTCGCTCT ACCTGCCGTT GGATATCCCG
GAAGACATGC GCACCGCGCG TCTGACCTCC AGCGAAAAAC ACCGTATTGT TGAGCGCGTG
ATTCGCCGCG TCAACGAGCG CATTCCGGTG GCCTACCTGA CCAACAAAGC CTGGTTCTGT
GGCCATGAAT TTTACGTCGA TGAACGCGTG CTGGTGCCGC GTTCGCCGAT TGGTGAACTG
ATCAACAATA AATTTGCCGG ACTTATCAGC AAGCAACCGC AGCATATTTT AGATATGTGT
ACTGGTAGCG GCTGCATCGC CATTGCCTGT GCTTATGCCT TCCCGGATGC AGAAGTCGAC
GCGGTGGATA TCTCTCCAGA CGCGCTGGCG GTTGCTGAAC AGAACATCGA AGAACACGGT
CTGATCCACA ACGTCATTCC GATTCGTTCC GATCTGTTCC GCGACTTGCC GAAAGTGCAG
TACGACCTGA TTGTCACTAA CCCGCCGTAT GTCGATGCGG AAGATATGTC CGACCTGCCA
AACGAATACC GCCACGAGCC GGAACTGGGC CTGGCATCTG GCACTGACGG CCTGAAACTG
ACGCGTCGCA TTCTCGGTAA CGCGGCAGAT TACCTTGCTG ATGATGGCGT GTTGATTTGT
GAAGTCGGCA ACAGCATGGT ACATCTTATG GAACAATATC CGGATGTTCC GTTCACCTGG
CTGGAGTTTG ATAACGGCGG CGATGGTGTG TTTATGCTCA CCAAAGAGCA GCTTATTGCC
GCACGAGAAC ATTTCGCGAT TTATAAAGAT TAA
|
|---|
| Protein sequence | MDKIFVDEAV NELQTIQDML RWSVSRFSAA NIWYGHGTDN PWDEAVQLVL PSLYLPLDIP
EDMRTARLTS SEKHRIVERV IRRVNERIPV AYLTNKAWFC GHEFYVDERV LVPRSPIGEL
INNKFAGLIS KQPQHILDMC TGSGCIAIAC AYAFPDAEVD AVDISPDALA VAEQNIEEHG
LIHNVIPIRS DLFRDLPKVQ YDLIVTNPPY VDAEDMSDLP NEYRHEPELG LASGTDGLKL
TRRILGNAAD YLADDGVLIC EVGNSMVHLM EQYPDVPFTW LEFDNGGDGV FMLTKEQLIA
AREHFAIYKD
|
|---|
| |