Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2351 |
Symbol | alkB |
ID | 5590977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2349672 |
End bp | 2350322 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640921477 |
Product | alkylated DNA repair protein AlkB |
Protein accession | YP_001459012 |
Protein GI | 157161694 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3145] Alkylated DNA repair protein |
TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGATC TGTTTGCCGA TGCTGAACCG TGGCAAGAGC CACTGGCGGC TGGAGCGGTA ATTTTGCACC GTTTTGCTTT TAACGCTGCG GAGCAACTAA TCCGCGATAT TAATGACGTT GCCAGCCAGT CGCCGTTTCG CCAGATGGTC ACCCCCGGGG GATATACCAT GTCGGTGGCG ATGACCAACT GTGGGCATCT GGGCTGGACG AGCCATCGGC AAGGTTATCT CTATTCGCCC ATTGATCCGC AAACAAATAA ACCGTGGCCC GCCATGCCAC AGAGTTTTCA TAATTTATGT CAACGTGCGG CTACGGCGGC GGGCTATCCA GATTTCCAGC CAGATGCTTG TCTTATCAAC CGCTACGCTC CTGGCGCGAA ACTGTCGCTG CATCAGGATA AAGACGAACC GGATCTGCGC GCGCCAATTG TTTCTGTTTC TCTGGGCTTA CCCGCGATTT TTCAATTTGG CGGCCTGAAA CGAAATGATC CGCTCAAACG TTTGTTGTTG GAACATGGCG ATGTGGTGGT ATGGGGCGGT GAATCGCGGC TGTTTTATCA CGGTATTCAA CCGTTGAAAG CGGGGTTTCA TCCACTCACC ATCGACTGCC GCTACAACCT GACATTCCGT CAGGCAGGTA AAAAAGAATA A
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Protein sequence | MLDLFADAEP WQEPLAAGAV ILHRFAFNAA EQLIRDINDV ASQSPFRQMV TPGGYTMSVA MTNCGHLGWT SHRQGYLYSP IDPQTNKPWP AMPQSFHNLC QRAATAAGYP DFQPDACLIN RYAPGAKLSL HQDKDEPDLR APIVSVSLGL PAIFQFGGLK RNDPLKRLLL EHGDVVVWGG ESRLFYHGIQ PLKAGFHPLT IDCRYNLTFR QAGKKE
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