Gene EcHS_A2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2317 
Symbol 
ID5594747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2317451 
End bp2318476 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content53% 
IMG OID640921443 
ProductABC transporter, permease protein 
Protein accessionYP_001458979 
Protein GI157161661 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGAC TCAGCCCCGT CAATCAGGCC CGTTGGGCGC GTTTTCGTCA TAACCGTCGC 
GGCTACTGGT CGTTATGGAT TTTCCTCGTC TTGTTTGGTT TGAGTTTGTG TTCTGAACTT
ATCGCCAACG ATAAACCGTT GCTGGTGCGT TATGACGGCA GTTGGTATTT CCCGTTATTG
AAAAACTACA GCGAAAGCGA TTTTGGCGGC CCGCTGGCAA GTCAGGCTGA TTATCAGGAC
CCGTGGCTGA AACAACGGCT GGAAAATAAC GGCTGGGTAC TGTGGGCACC GATTCGCTTT
GGTGCTACCA GTATCAACTT TGCTACCGAT AAGCCCTTCC CTTCTCCACC CTCCCGGCAA
AACTGGCTGG GAACGGATGC CAACGGCGGC GATGTGCTGG CACGCATTCT CTATGGCACG
CGGATCTCGG TTCTGTTTGG CCTGATGCTG ACTCTCTGTT CCAGCGTGAT GGGCGTGCTG
GCGGGGGCGC TACAAGGCTA TTACGGCGGT AAAGTCGATC TCTGGGGACA ACGCTTTATT
GAAGTATGGT CGGGGATGCC GACGCTGTTT TTGATTATTT TACTTTCCAG CGTCGTACAG
CCTAACTTCT GGTGGCTGCT GGCAATTACT GTCTTGTTTG GCTGGATGAG TCTGGTCGGC
GTGGTGCGGG CGGAGTTTTT ACGTACTCGT AATTTCGACT ACATTCGTGC GGCACAGGCG
CTTGGCGTCA GCGATCGCAG TATCATCCTG CGTCATATGT TGCCTAATGC CATGGTCGCG
ACCCTCACCT TTTTACCGTT TATTTTATGT AGTTCGATAA CCACCCTGAC CTCGCTCGAT
TTCCTCGGCT TCGGTCTACC GCTCGGTTCA CCGTCACTCG GTGAACTGCT GTTACAAGGG
AAAAATAACC TTCAGGCCCC GTGGCTTGGG ATCACCGCCT TCTTGTCGGT GGCGATATTA
TTGTCTTTGC TGATCTTTAT TGGTGAAGCC GTCCGCGACG CATTTGATCC TAATAAGGCG
GTGTAG
 
Protein sequence
MSRLSPVNQA RWARFRHNRR GYWSLWIFLV LFGLSLCSEL IANDKPLLVR YDGSWYFPLL 
KNYSESDFGG PLASQADYQD PWLKQRLENN GWVLWAPIRF GATSINFATD KPFPSPPSRQ
NWLGTDANGG DVLARILYGT RISVLFGLML TLCSSVMGVL AGALQGYYGG KVDLWGQRFI
EVWSGMPTLF LIILLSSVVQ PNFWWLLAIT VLFGWMSLVG VVRAEFLRTR NFDYIRAAQA
LGVSDRSIIL RHMLPNAMVA TLTFLPFILC SSITTLTSLD FLGFGLPLGS PSLGELLLQG
KNNLQAPWLG ITAFLSVAIL LSLLIFIGEA VRDAFDPNKA V