Gene EcHS_A2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2316 
Symbol 
ID5594746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2316357 
End bp2317451 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content51% 
IMG OID640921442 
ProductABC transporter, permease protein 
Protein accessionYP_001458978 
Protein GI157161660 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCTT ACCTGATTCG CCGTCTGTTG CTGGTGATCC CAACATTATG GGCGATTATC 
ACCATCAACT TTTTCATCGT GCAAATTGCG CCTGGCGGTC CGGTCGACCA GGCCATCGCC
GCCATTGAGT TTGGTAATGC CGGAGTATTA CCCGGCGCAG GCGGTGAAGG TGTTCGTGCC
AGCCATGCGC AAACGGGTGT CGGCAATATC AGCGACAGTA ATTACCGTGG CGGACGCGGA
TTAGATCCAG AAGTGATCGC TGAGATCACT CATCGCTACG GTTTTGATAA GCCGATCCAC
GAACGTTACT TCAAAATGCT CTGGGACTAC ATCCGCTTTG ATTTTGGCGA TAGCCTGTTT
CGCAGCGCCT CGGTGCTGAC GCTGATTAAA GACAGTCTGC CGGTTTCCAT CACCCTCGGA
TTGTGGAGCA CGCTGATTAT CTATCTGGTG TCGATTCCGT TAGGCATTCG CAAAGCTGTT
TATAATGGGA GCCGCTTTGA CGTCTGGAGT AGCGCATTTA TCATCATCGG CTACGCCATT
CCGGCCTTTT TGTTTGCCAT CCTGCTGATT GTCTTCTTCG CGGGCGGCAG CTATTTCGAC
CTGTTCCCTC TACGCGGCCT GGTTTCCGCT AACTTTGATT CGCTGCCGTG GTATCAGAAA
ATCACCGATT ATCTGTGGCA TATCACGCTG CCGGTGCTGG CGACAGTGAT TGGTGGCTTT
GCGGCGCTGA CCATGCTGAC AAAAAACTCA TTCCTTGATG AAGTGCGCAA GCAATACGTG
GTGACCGCGC GTGCGAAAGG GGTAAGTGAA AAAAATATTC TCTGGAAACA TGTGTTCCGC
AACGCCATGC TGCTGGTGAT TGCCGGTTTT CCGGCGACGT TTATCAGCAT GTTTTTTACC
GGCTCGCTGC TGATTGAGGT GATGTTTTCA CTCAATGGTC TGGGCTTACT GGGCTACGAA
GCGACCGTCT CGCGCGATTA TCCTGTAATG TTTGGTACCT TGTATATTTT CACCCTGATT
GGCCTGCTGC TGAATATTGT CAGTGATATC AGCTATACGC TGGTTGATCC GCGTATTGAT
TTTGAGGGAC GTTAA
 
Protein sequence
MGAYLIRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA AIEFGNAGVL PGAGGEGVRA 
SHAQTGVGNI SDSNYRGGRG LDPEVIAEIT HRYGFDKPIH ERYFKMLWDY IRFDFGDSLF
RSASVLTLIK DSLPVSITLG LWSTLIIYLV SIPLGIRKAV YNGSRFDVWS SAFIIIGYAI
PAFLFAILLI VFFAGGSYFD LFPLRGLVSA NFDSLPWYQK ITDYLWHITL PVLATVIGGF
AALTMLTKNS FLDEVRKQYV VTARAKGVSE KNILWKHVFR NAMLLVIAGF PATFISMFFT
GSLLIEVMFS LNGLGLLGYE ATVSRDYPVM FGTLYIFTLI GLLLNIVSDI SYTLVDPRID
FEGR