Gene EcHS_A2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2272 
Symbol 
ID5593614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2268907 
End bp2269668 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID640921401 
Productacetoin dehydrogenase 
Protein accessionYP_001458937 
Protein GI157161619 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGG TTGCGATTAT TACCGCCTCC GATTCGGGGA TCGGCAAAGA GTGCGCGTTA 
TTACTGGCGC AGCAGGGGTT TGATATTGGT ATTACCTGGA ACTCAGATGA AGAAGGGGCA
AAAGATACCG CGCGTGAGGT AGTTAGCCAC GGCGTACGTG CGGAGATCGT GCAGCTGGAT
CTCGGTAAAC TGCCAGAAGG TGCGCAGGCG CTGGAGAAAC TCATTCAACG GCTGGGGCGT
ATTGATGTGC TGGTGAATAA TGCGGGCGCA ATGACCAAAG CGCCGTTTCT TGATATGGCT
TTCGATGAGT GGCGCAAGAT TTTTACCGTT GATGTCGATG GTGCATTTTT ATGCTCACAA
ATTGCGGCCC GCCAGATGGT GAAACAAGGG CAGGGCGGTC GCATCATCAA CATTACGTCG
GTACATGAAC ATACGCCGCT GCCGGATGCC AGCGCCTACA CAGCCGCTAA ACATGCGCTC
GGTGGGTTAA CCAAAGCGAT GGCGCTGGAG CTGGTCAGGC ATAAGATTTT GGTGAACGCA
GTCGCGCCTG GGGCGATCGC CACGCCAATG AATGGCATGG ATGACAGCGA CGTGAAGCCC
GACGCGGAGC CTTCGATTCC TCTGCGGCGT TTTGGCGCAA CGCATGAGAT TGCCAGCCTG
GTAGCGTGGC TGTGCTCAGA GGGCGCAAAT TACACCACCG GGCAGTCGTT GATAGTGGAT
GGCGGCTTTA TGTTGGCGAA TCCGCAGTTC AACCCAGAAT AG
 
Protein sequence
MAQVAIITAS DSGIGKECAL LLAQQGFDIG ITWNSDEEGA KDTAREVVSH GVRAEIVQLD 
LGKLPEGAQA LEKLIQRLGR IDVLVNNAGA MTKAPFLDMA FDEWRKIFTV DVDGAFLCSQ
IAARQMVKQG QGGRIINITS VHEHTPLPDA SAYTAAKHAL GGLTKAMALE LVRHKILVNA
VAPGAIATPM NGMDDSDVKP DAEPSIPLRR FGATHEIASL VAWLCSEGAN YTTGQSLIVD
GGFMLANPQF NPE