| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2086 |
|---|
| Symbol | |
|---|
| ID | 5593000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2072118 |
|---|
| End bp | 2072699 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640921227 |
|---|
| Product | bacteriophage Mu Gp45 protein |
|---|
| Protein accession | YP_001458771 |
|---|
| Protein GI | 157161453 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4384] Mu-like prophage protein gp45 |
|---|
| TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA ATTTAAAGAA ATCGGCCACG CGCATCGCCG GCATGCTGGG CATTGGCCGT
ATTACCACGC AGAAAGATAG CGGGGTTGTG CAGGAAATCC AGTACCAGAC TCCGCTGGAA
GTGGCCAGCG CCCCACGGCT CTCTGATTTT GGTTTTTCAT CGGGGTTACC GGCGGGATCG
GATGTGCTTA TTGCCTTTCT CGGCGGGGAC CGCTCCAGTC CTGTCGTCAT TGCCTCTAAC
CATCAAAGCT TCCGGTATAC CGGGCTTAAG CCAGGCGAAA CCGTGGTCTA TAACCAGCAG
GGGATGAATA TTCATCTGAC CGAGGAGGGA ATTTTCATTG ATGCGAAAGG CAAAGATGTA
GAGATCAATA ATGCCAGAAA CATCACCGCG ACGGCAACGG AACAGGTAAA GCTGGTTACC
CCCAAACTCC TGGTGACGGG TGACATCATC GATAACTGCG AGACGAACAA TTCAACGCTC
AAAGCGCTGC GGGATGCTCA CAACGATCAT GACCATGACG TTAAAAAAGT TCAGTCCGGC
GATAGCACGA TCATAAGCGA AAAAACAGAG AGTCAGGTAT GA
|
|---|
| Protein sequence | MNQNLKKSAT RIAGMLGIGR ITTQKDSGVV QEIQYQTPLE VASAPRLSDF GFSSGLPAGS
DVLIAFLGGD RSSPVVIASN HQSFRYTGLK PGETVVYNQQ GMNIHLTEEG IFIDAKGKDV
EINNARNITA TATEQVKLVT PKLLVTGDII DNCETNNSTL KALRDAHNDH DHDVKKVQSG
DSTIISEKTE SQV
|
|---|
| |