Gene EcHS_A1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1942 
Symboleda 
ID5595004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1951092 
End bp1951733 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID640921087 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_001458636 
Protein GI157161318 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT GGAAAACAAG TGCAGAATCA ATCCTGACCA CCGGCCCGGT TGTACCGGTT 
ATCGTGGTAA AAAAACTGGA ACACGCGGTG CCGATGGCAA AAGCGTTGGT TGCTGGTGGG
GTGCGCGTTC TGGAAGTGAC TCTGCGTACC GAGTGTGCAG TTGACGCTAT CCGTGCTATC
GCCAAAGAAG TGCCTGAAGC GATTGTGGGT GCCGGTACGG TGCTGAATCC ACAGCAGCTG
GCAGAAGTCA CTGAAGCGGG TGCACAGTTC GCAATTAGCC CGGGTCTGAC CGAGCCGCTG
CTGAAAGCTG CTACCGAAGG GACTATTCCT CTGATTCCGG GGATCAGCAC TGTTTCCGAA
CTGATGCTGG GTATGGACTA CGGTTTGAAA GAGTTCAAAT TCTTCCCGGC TGAAGCTAAC
GGCGGCGTGA AAGCCCTGCA GGCGATCGCG GGTCCGTTCT CCCAGGTCCG TTTCTGCCCG
ACGGGTGGTA TTTCTCCGGC TAACTACCGT GACTACCTGG CGCTGAAAAG CGTGCTGTGC
ATCGGTGGTT CCTGGCTGGT TCCGGCAGAT GCGCTGGAAG CGGGCGATTA CGACCGCATT
ACTAAGCTGG CGCGTGAAGC TGTAGAAGGC GCTAAGCTGT AA
 
Protein sequence
MKNWKTSAES ILTTGPVVPV IVVKKLEHAV PMAKALVAGG VRVLEVTLRT ECAVDAIRAI 
AKEVPEAIVG AGTVLNPQQL AEVTEAGAQF AISPGLTEPL LKAATEGTIP LIPGISTVSE
LMLGMDYGLK EFKFFPAEAN GGVKALQAIA GPFSQVRFCP TGGISPANYR DYLALKSVLC
IGGSWLVPAD ALEAGDYDRI TKLAREAVEG AKL