| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1920 |
|---|
| Symbol | |
|---|
| ID | 5595129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1930672 |
|---|
| End bp | 1931553 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640921063 |
|---|
| Product | heat shock protein HtpX |
|---|
| Protein accession | YP_001458614 |
|---|
| Protein GI | 157161296 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0000000729476 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAA TCGCGCTCTT CCTGCTAACG AACCTGGCCG TAATGGTCGT TTTCGGGCTG
GTACTGAGCC TGACAGGGAT ACAGTCGAGC AGCGTTCAGG GGCTGATGAT CATGGCCTTG
CTGTTCGGTT TTGGTGGTTC CTTCGTTTCG CTTCTGATGT CCAAATGGAT GGCATTACGA
TCTGTTGGCG GGGAAGTGAT CGAGCAACCG CGTAACGAAA GGGAACGTTG GCTGGTCAAT
ACTGTAGCAA CCCAGGCTCG TCAGGCGGGG ATCGCTATGC CGCAAGTGGC TATCTACCAT
GCGCCGGACA TCAACGCTTT TGCAACCGGT GCGCGCCGTG ATGCCTCTCT GGTTGCTGTC
AGCACCGGTT TGCTGCAGAA CATGAGCCCG GATGAAGCCG AGGCGGTAAT TGCTCACGAA
ATCAGCCACA TCGCCAATGG TGATATGGTT ACCATGACGC TGATTCAGGG CGTGGTGAAC
ACCTTCGTTA TCTTTATTTC CCGTATTCTG GCGCAGCTTG CCGCGGGTTT TATGGGCGGA
AATCGTGATG AAGGTGAAGA GAGCAACGGC AACCCGCTGA TCTACTTTGC GGTTGCAACG
GTTCTGGAAC TGGTGTTTGG TATTCTGGCG AGCATTATCA CCATGTGGTT CTCGCGTCAT
CGTGAATTCC ATGCTGATGC CGGTTCGGCA AAACTGGTTG GTCGCGAGAA AATGATTGCC
GCGCTGCAGC GCCTGAAAAC CAGCTATGAA CCGCAAGAAG CAACCAGCAT GATGGCTTTC
TGCATTAACG GTAAGTCGAA ATCGCTCAGT GAGTTGTTCA TGACTCACCC GCCGCTGGAT
AAACGAATTG AAGCTCTGCG TACGGGTGAA TACCTGAAGT AA
|
|---|
| Protein sequence | MMRIALFLLT NLAVMVVFGL VLSLTGIQSS SVQGLMIMAL LFGFGGSFVS LLMSKWMALR
SVGGEVIEQP RNERERWLVN TVATQARQAG IAMPQVAIYH APDINAFATG ARRDASLVAV
STGLLQNMSP DEAEAVIAHE ISHIANGDMV TMTLIQGVVN TFVIFISRIL AQLAAGFMGG
NRDEGEESNG NPLIYFAVAT VLELVFGILA SIITMWFSRH REFHADAGSA KLVGREKMIA
ALQRLKTSYE PQEATSMMAF CINGKSKSLS ELFMTHPPLD KRIEALRTGE YLK
|
|---|
| |