Gene EcHS_A1852 details

Gene Information

• Locus tag: EcHS_A1852
• Symbol: pncA
• ID: 5591083
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1869969
• End bp: 1870610
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640920996
• Product: nicotinamidase/pyrazinamidase
• Protein accession: YP_001458548
• Protein GI: 157161230
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 0.0167185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCCTC GCGCCCTGTT ACTGGTCGAT TTACAAAATG ATTTCTGTGC TGGTGGCGCG 
CTCGCCGTGC CGGAAGGTGA CAGTACGGTG GATGTCGCTA ACCGCCTGAT TGACTGGTGC 
CAGTCGCGCG GTGAAGCGGT TATCGCCAGT CAGGACTGGC ACCCGGCGAA TCACGGCAGT 
TTTGCCAGTC AGCACGGTGT AGAGCCTTAT ACGCCAGGCC AACTCGACGG TTTGCCACAA 
ACCTTCTGGC CAGATCACTG TGTGCAGAAC AGTGAAGGCG CACAATTACA TCCGTTACTG 
CACCAAAAAG CGATCGCAGC GGTGTTCCAT AAAGGCGAAA ATCCTTTAGT TGACAGTTAC 
AGTGCCTTTT TTGATAACGG CCGTCGGCAG AAAACCTCTC TCGATGACTG GTTACGCGAT 
CATGAAATCG ATGAATTGAT CGTTATGGGC CTGGCTACTG ACTATTGCGT GAAGTTTACC 
GTGCTGGACG CGTTACAGTT AGGTTATAAG GTAAACGTGA TTACCGATGG TTGTCGTGGC 
GTGAATATCC AGCCACAGGA CAGTGCGCAC GCGTTTATGG AGATGTCAGC TGCTGGGGCA 
ACGCTATATA CGCTGGCAGA CTGGGAAGAG ACACAGGGGT AA 

 

Protein sequence

MPPRALLLVD LQNDFCAGGA LAVPEGDSTV DVANRLIDWC QSRGEAVIAS QDWHPANHGS 
FASQHGVEPY TPGQLDGLPQ TFWPDHCVQN SEGAQLHPLL HQKAIAAVFH KGENPLVDSY 
SAFFDNGRRQ KTSLDDWLRD HEIDELIVMG LATDYCVKFT VLDALQLGYK VNVITDGCRG 
VNIQPQDSAH AFMEMSAAGA TLYTLADWEE TQG