Gene EcHS_A1840 details

Gene Information

• Locus tag: EcHS_A1840
• ID: 5592115
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1856829
• End bp: 1857482
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640920984
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_001458536
• Protein GI: 157161218
• COG category: [R] General function prediction only
• COG ID: [COG4136] ABC-type uncharacterized transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTGCG TGAAAAATGT TTCGCTACGT TTACCAGAAA GCCGCTTGCT GACAAACGTT 
AACTTTACGG TGGATAAAGG TGACATTGTC ACGTTAATGG GGCCGTCTGG TTGTGGAAAA 
TCCACTCTGT TTTCATGGAT GATTGGTGCA CTGGCCGAAC AGTTTTCTTG TACAGGTGAG 
CTATGGCTCA ATGAGCAACG GATTGACATC CTACCCACCG CACAGCGTCA GATTGGCATT 
CTTTTTCAGG ATGCACTGTT ATTTGACCAG TTCAGTGTCG GGCAAAATTT ACTGCTGGCG 
CTACCGGCGA CACTTAAAGG GAATGCCCGA CGTAATGCCG TGAATGATGC ACTTGAGCGT 
TCAGGCCTTG AGGGAGCTTT CCATCAGGAT CCTGCCACTT TGTCTGGCGG TCAGCGAGCG 
CGCGTTGCTC TACTACGCGC CCTTCTCGCC CAACCAAAAG CGTTACTCCT GGATGAGCCA 
TTCAGCCGTC TTGATGTGGC TCTGCGCGAT AATTTTCGCC AGTGGGTGTT CAGCGAAGTT 
CGCGCCCTGG CGATCCCCGT CGTTCAGGTA ACGCACGATC TCCAGGATGT TCCTGCTGAT 
AGTTCTGTTC TGGATATGGC GCAGTGGTCA GAAAATTACA ACAAACTGCG ATAA 

 

Protein sequence

MLCVKNVSLR LPESRLLTNV NFTVDKGDIV TLMGPSGCGK STLFSWMIGA LAEQFSCTGE 
LWLNEQRIDI LPTAQRQIGI LFQDALLFDQ FSVGQNLLLA LPATLKGNAR RNAVNDALER 
SGLEGAFHQD PATLSGGQRA RVALLRALLA QPKALLLDEP FSRLDVALRD NFRQWVFSEV 
RALAIPVVQV THDLQDVPAD SSVLDMAQWS ENYNKLR