Gene EcHS_A1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1789 
SymbolbtuD 
ID5591657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1809610 
End bp1810359 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID640920936 
Productvitamin B12-transporter ATPase 
Protein accessionYP_001458488 
Protein GI157161170 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4138] ABC-type cobalamin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.841153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTG TGATGCAGTT ACAAGATGTT GCGGAATCTA CCCGCCTGGG GCCGCTTTCT 
GGCGAGGTTC GGGCTGGGGA GATCCTGCAC CTGGTGGGGC CTAATGGCGC GGGTAAGAGT
ACCTTACTGG CGCGAATGGC CGGAATGACC AGCGGTAAGG GAAGCATTCA GTTCGCGGGG
CAACCACTGG AAGCATGGTC CGCAACAAAA CTCGCGCTGC ATCGCGCCTA TCTTTCACAA
CAGCAGACGC CGCCGTTTGC AATGCCGGTC TGGCACTACC TGACACTGCA TCAGCACGAT
AAAACGCGTA CCGAACTACT GAATGATGTC GCAGGGGCGC TGGCTCTTGA TGACAAACTC
GGACGTAGCA CCAATCAACT TTCCGGCGGT GAATGGCAAC GCGTACGTCT TGCTGCGGTG
GTGTTGCAAA TCACACCACA AGCCAATCCC GCAGGCCAAT TGCTGCTTCT TGATGAGCCG
ATGAACAGTC TTGATGTTGC GCAACAAAGT GCGTTAGACA AAATTCTGAG CGCGCTGTGT
CAGCAAGGAC TGGCGATTGT GATGAGCAGT CACGATCTCA ACCACACATT GCGTCATGCG
CATCGGGCGT GGTTGCTAAA AGGTGGAAAA ATGCTGGCCA GTGGACGCAG GGAAGAGGTG
CTCACGCCGC CAAATCTGGC GCAGGCCTAT GGGATGAATT TTCGCCGTCT GGATATCGAA
GGTCACAGAA TGCTGATTTC GACCATCTGA
 
Protein sequence
MSIVMQLQDV AESTRLGPLS GEVRAGEILH LVGPNGAGKS TLLARMAGMT SGKGSIQFAG 
QPLEAWSATK LALHRAYLSQ QQTPPFAMPV WHYLTLHQHD KTRTELLNDV AGALALDDKL
GRSTNQLSGG EWQRVRLAAV VLQITPQANP AGQLLLLDEP MNSLDVAQQS ALDKILSALC
QQGLAIVMSS HDLNHTLRHA HRAWLLKGGK MLASGRREEV LTPPNLAQAY GMNFRRLDIE
GHRMLISTI