| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1607 |
|---|
| Symbol | |
|---|
| ID | 5594292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1630137 |
|---|
| End bp | 1631525 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640920759 |
|---|
| Product | putative succinate semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001458315 |
|---|
| Protein GI | 157160997 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.764255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTA CTCCGGCAAC TCATGCAATT TCGATAAATC CTGCCACGGG TGAACAACTT
TCTGTGCTGC CGTGGGCTGG CGCTGACGAT ATCGAAAACG CACTTCAGCT GGCGGCAGCA
GGCTTTCGCG ACTGGCGCGA GACAAATATA GATTATCGTG CTGAAAAACT GCGTGATATC
GGTAAGGCTC TGCGCGCTCG TAGCGAAGAA ATGGCGCAAA TGATCACCCG CGAAATGGGC
AAACCAATCA ACCAGGCGCG CGCTGAAGTG GCGAAATCGG CGAATTTGTG TGACTGGTAT
GCAGAACATG GTCCGGCAAT GCTGAAGGCG GAACCTACGC TGGTGGAAAA TCAGCAGGCG
GTTATTGAGT ATCGACCGTT GGGGACGATT CTGGCGATTA TGCCGTGGAA TTTTCCGTTA
TGGCAGGTGA TGCGTGGCGC TGTTCCCATC ATTCTTGCAG GTAACGGCTA CTTACTTAAA
CATGCGCCGA ATGTGATGGG CTGTGCACAG CTCATTGCCC AGGTGTTTAA AGATGCGGGT
ATCCCACAAG GCGTATATGG CTGGCTGAAT GCCGACAACG ACGGTGTCAG TCAGATGATT
AAAGACTCGC GCATTGCTGC TGTCACGGTG ACCGGAAGTG TTCGTGCGGG AGCGGCTATT
GGCGCACAGG CTGGAGCGGC ACTGAAAAAA TGCGTACTGG AACTGGGCGG TTCGGATCCG
TTTATTGTGC TTAACGATGC CGATCTGGAA CTGGCGGTGA AAGCGGCGGT AGCCGGACGT
TATCAGAATA CCGGACAGGT ATGTGCAGCG GCAAAACGCT TTATTATCGA AGAGGGAATT
GCTTCGGCAT TTACCGAACG TTTTGTGGCA GCTGCGGCAG CCTTGAAAAT GGGCGATCCC
CGTGACGAAG AGAACGCTCT CGGACCAATG GCTCGTTTTG ATTTACGTGA TGAGCTGCAT
CATCAGGTGG AGAAAACCCT GGCGCAGGGT GCGCGTTTGT TACTGGGCGG GGAAAAGATG
GCTGGGGCAG GTAACTACTA TCCGCCAACG GTTCTGGCGA ATGTTACCCC AGAAATGACC
GCGTTTCGGG AAGAAATGTT TGGCCCCGTT GCGGCAATCA CCATTGCGAA AGATGCAGAA
CATGCACTGG AACTGGCTAA TGATAGTGAG TTCGGCCTTT CAGCGACCAT TTTTACCACT
GACGAAACAC AGGCCAGACA TATGGCGGCA CGTCTGGAAT GCGGTGGGGT GTTTATCAAT
GGTTATTGTG CCAGCGACGC GCGAGTGGCC TTTGGTGGCG TGAAAAAGAG TGGCTTTGGT
CGTGAGCTTT CCCATTTCGG CTTACACGAA TTCTGTAATA TCCAGACGGT GTGGAAAGAC
CGGATCTGA
|
|---|
| Protein sequence | MTITPATHAI SINPATGEQL SVLPWAGADD IENALQLAAA GFRDWRETNI DYRAEKLRDI
GKALRARSEE MAQMITREMG KPINQARAEV AKSANLCDWY AEHGPAMLKA EPTLVENQQA
VIEYRPLGTI LAIMPWNFPL WQVMRGAVPI ILAGNGYLLK HAPNVMGCAQ LIAQVFKDAG
IPQGVYGWLN ADNDGVSQMI KDSRIAAVTV TGSVRAGAAI GAQAGAALKK CVLELGGSDP
FIVLNDADLE LAVKAAVAGR YQNTGQVCAA AKRFIIEEGI ASAFTERFVA AAAALKMGDP
RDEENALGPM ARFDLRDELH HQVEKTLAQG ARLLLGGEKM AGAGNYYPPT VLANVTPEMT
AFREEMFGPV AAITIAKDAE HALELANDSE FGLSATIFTT DETQARHMAA RLECGGVFIN
GYCASDARVA FGGVKKSGFG RELSHFGLHE FCNIQTVWKD RI
|
|---|
| |