Gene EcHS_A1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1568 
Symbol 
ID5591953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1573924 
End bp1574850 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content55% 
IMG OID640920721 
Productputative ABC transport system ATP-binding protein 
Protein accessionYP_001458277 
Protein GI157160959 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGACA CGTTATTAAC GTTACGCGAC GTCCATATCA ATTTCCCGGC CCGTAAAAAC 
TGGCTTGGTA AAACTACGGA ACATGTTCAT GCGATTAATG GTATTGATTT ACAGATCCGC
CGTGGTGAAA CCTTAGGGAT CGTCGGCGAG TCAGGCTGCG GCAAAAGCAC CCTCGCACAG
CTTTTAATGG GTATGCTGCA ACCGAGCCAC GGGCAGTACA TCCGTTCTGG CTCACAACGC
ATTATGCAGA TGGTGTTTCA GGACCCGCTC TCTTCGCTCA ATCCGCGCTT ACCGGTGTGG
CGCATCATCA CAGAACCGCT CTGGATAGCT AAGCGTAGTA GTGAACAACA GCGGCGAGCG
TTGGCAGAGG AGCTGGCTGT GCAGGTGGGT ATTCGTCCGG AGTATCTCGA CCGCCTGCCT
CATGCGTTCT CCGGCGGGCA GCGGCAACGT ATCGCCATTG CCAGAGCACT CTCTTCGCAG
CCTGACGTGA TTGTGCTTGA TGAGCCAACC TCTGCGCTGG ATATCTCCGT GCAGGCGCAG
ATCCTCAATT TACTGGTAAC GCTACAGGAA AATCACGGGC TGACCTATGT GCTGATTTCA
CACAATGTCT CGGTGATACG TCATATGAGC GATCGGGTGG CGGTGATGTA TCTCGGGCAG
ATTGTAGAAC TGGGCGACGC GCAGCAGGTG CTGACGGCAC CTGCACATCC ATACACCCGA
TTATTGCTGG ATTCCCTCCC CGCCATTGAT AAACCGCTGG AGGAAGAATG GGCATTACGT
AAAACGGATC TGCCGGGAAA CCGCACGTTG CCGCAAGGCT GTTTTTTCTA CGAACGTTGC
CCGCTGGCAA CCCACGGATG TGAAGTCCGG CAATCATTAG CAATAAGGGA GGACGGACGT
GAGCTCCGGT GCTGGCGGGC GCTGTAG
 
Protein sequence
MSDTLLTLRD VHINFPARKN WLGKTTEHVH AINGIDLQIR RGETLGIVGE SGCGKSTLAQ 
LLMGMLQPSH GQYIRSGSQR IMQMVFQDPL SSLNPRLPVW RIITEPLWIA KRSSEQQRRA
LAEELAVQVG IRPEYLDRLP HAFSGGQRQR IAIARALSSQ PDVIVLDEPT SALDISVQAQ
ILNLLVTLQE NHGLTYVLIS HNVSVIRHMS DRVAVMYLGQ IVELGDAQQV LTAPAHPYTR
LLLDSLPAID KPLEEEWALR KTDLPGNRTL PQGCFFYERC PLATHGCEVR QSLAIREDGR
ELRCWRAL