| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1494 |
|---|
| Symbol | |
|---|
| ID | 5592328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1501337 |
|---|
| End bp | 1502629 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640920651 |
|---|
| Product | PAP2 family protein |
|---|
| Protein accession | YP_001458207 |
|---|
| Protein GI | 157160889 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTACAAG GCGCTGGCTG GTTATTGTTG CTGGCCCCGT TTTTCTTCTT CACCTATGGA
TCTCTTAATC AGTTCACCGC GGTTCAGGAC CTTAACAGCC ATGATATTCC CAGTCAGGTA
TTCGGTTGGG AAACGGCGAT CCCTTTTCTT CCCTGGACTA TTGTTCCTTA CTGGAGTCTG
GATCTTTTAT ATGGATTTTC GCTGTTCGTT TGTAGCACGA CATTCGAACA GCGCCGACTT
GTCCACCGGC TTATTCTGGC AACGGTAATG GCCTGCTGCG GTTTTTTTCT CTACCCGCTG
AAGTTTAGTT TTATCCGTCC TGAAGTGAGT GGGGTGACAG GATGGCTATT TTCGCAACTT
GAACTGTTTG ATCTGCCTTA TAACCAGTCT CCTTCGCTGC ATATTATTCT CTGCTGGCTA
CTTTGGCGTC ACTTTCGTCA GCATCTGGCT GTGAGGTGGC GTAAAGTCTG CGGCGGATGG
TTTTTACTCA TCGCCATTTC GACGCTGACG ACCTGGCAGC ATCATTTTAT TGATGTCATC
ACGGGGCTGG CGGTAGGTAT GTTAATTGAC TGGATGGTGC CCGTCGACCG TCGTTGGAAT
TATCAGAAAC CTGATCAACG TCGAATCAAA ATAGCACTGC CATATGTCGT AGGCGCGGGC
TCGTGCATTG TGTTGATGGA GCTAATGATA ATGCTTCAGT TATGGTGGTC AGTCTGGTTA
TGTTGGCCAG TATTATCGCT ATTCATCATT GGCCGTGGGT ACGGTGGGCT TGGCGCGATA
ACAACAGGGA AAGATAGTCA GGGGAAACTC CCGCCCGCCG TTTACTGGCT GACATTGCCC
TGGCGTATCG GGATGTGGCT GTCTATGCGT TGGTCTTGTC TTCGCCTGGA GCCGGTGAGC
AAAATTACTG CTGGTGTTTA TTTAGGGGCG TTTCCACGAC ATATTCCGGC ACAGAATGCG
GTTCTGGACG TCACCTTTGA ATTCCCTCGC GGACGAGCCA CAAAAGATCG ACTCTATTTT
TGTGTACCGA TGCTGGATCT GGTGGTTCCG GAAGAGGGGG AGCTCCGACA GGCCGTGGCG
ATGCTGGAAA CATTACGCGA AGAGCAAGGC AGCGTTCTGG TCCATTGTGC ATTGGGATTA
TCGCGCAGTG CGCTGGTGGT GGCGGCATGG TTGTTATGTT ACGGACACTG TAAAACCGTT
AATGAAGCGA TTAGCTATAT TCGAGCCAGA CGCCCGCAGA TTGTGCTGAC AGACGAGCAC
AAAGCGATGC TGAGATTATG GGAAAACAGG TAA
|
|---|
| Protein sequence | MLQGAGWLLL LAPFFFFTYG SLNQFTAVQD LNSHDIPSQV FGWETAIPFL PWTIVPYWSL
DLLYGFSLFV CSTTFEQRRL VHRLILATVM ACCGFFLYPL KFSFIRPEVS GVTGWLFSQL
ELFDLPYNQS PSLHIILCWL LWRHFRQHLA VRWRKVCGGW FLLIAISTLT TWQHHFIDVI
TGLAVGMLID WMVPVDRRWN YQKPDQRRIK IALPYVVGAG SCIVLMELMI MLQLWWSVWL
CWPVLSLFII GRGYGGLGAI TTGKDSQGKL PPAVYWLTLP WRIGMWLSMR WSCLRLEPVS
KITAGVYLGA FPRHIPAQNA VLDVTFEFPR GRATKDRLYF CVPMLDLVVP EEGELRQAVA
MLETLREEQG SVLVHCALGL SRSALVVAAW LLCYGHCKTV NEAISYIRAR RPQIVLTDEH
KAMLRLWENR
|
|---|
| |