Gene EcHS_A1484 details

Gene Information

• Locus tag: EcHS_A1484
• Symbol: pcaF
• ID: 5591519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1484086
• End bp: 1485291
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640920641
• Product: beta-ketoadipyl CoA thiolase
• Protein accession: YP_001458197
• Protein GI: 157160879
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02430] beta-ketoadipyl CoA thiolase

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGAAG CCTTTATCTG TGACGGAATT CGTACGCCAA TTGGTCGCTA CGGCGGGGCA 
TTATCAGGTG TTCGGGCTGA CGATCTGGCT GCTATCCCTT TGCGGGAGCT GCTGGTGCGA 
AACCCGCGTC TCGATGCGGA GTGTATCGAT GATGTGATCC TCGGCTGTGC TAATCAGGCG 
GGAGAAGATA ACCGTAACGT AGCCCGGATG GCGACTTTAC TGGCGGGGCT GCCGCAGAGT 
GTTTCCGGCA CAACCATTAA CCGCTTGTGT GGTTCCGGGC TGGACGCACT GGGGTTCGCC 
GCACGGGCGA TTAAAGCGGG CGATGGCGAT TTGCTGATCG CCGGTGGCGT GGAGTCAATG 
TCTCGGGCAC CGTTTGTTAT GGGCAAGGCA ACCAGTGCAT TTTCTCGTCA GGCTGAGATG 
TTTGATACCA CTATTGGCTG GCGATTTGTG AACCCGCTCA TGGCTCAACA ATTTGGAACT 
GACAGCATGC CGGAAACGGC AGAGAATGTA GCTGAACTGT TAAAAATCTC GCGAGAAGAT 
CAAGATAGTT TTGCGCTACG CAGTCAGCAA CGTTCGGCAA AAGCGCAATC TTCAGGCATT 
TTAGCTGAAG AGATTGTTCC GGTTGTGTTG AAAAATAAGA AAGGTGTTGT AACAGAAATA 
CAACATGACG AGCATTTGCG CCCGGAAACG ACGCTGGAAC AGTTACGTGG ACTAAAAGCA 
CCATTTCGTG CCAATGGAGT GATCACCGCA GGCAATGCCT CCGGGGTGAA TGACGGAGCC 
GCTGCGTTGA TTATTGCCAG TGAACAGATG GCAGCAGCGC AAGGACTGAC ACCGCGAGCG 
CGTATCGTAG CCATGGCAAC CGCCGGGGTG GAACCGCGCC TGATGGGGCT TGGTCCGGTG 
CCTGCAACTC GCCGGGTGCT GGAACGCGCG GGGCTGAGTA TTCACGATAT GGACGTGATT 
GAACTGAACG AAGCATTCGC GGCCCAGGCG TTGGGTGTAC TACGCGAATT GGGGCTGCCT 
GATGATGCCC CACATGTTAA CCCCAACGGA GGCGCTATCG CCTTAGGCCA TCCGTTGGGA 
ATGAGTGGTG CCCGCCTGGC ACTGGCTGCC AGCCATGAGC TGCATCGGCG TAACGGTCGT 
TACGCATTGT GCACCATGTG CATCGGTGTC GGTCAGGGCA TCGCCATGAT TCTGGAGCGT 
GTTTGA 

 

Protein sequence

MREAFICDGI RTPIGRYGGA LSGVRADDLA AIPLRELLVR NPRLDAECID DVILGCANQA 
GEDNRNVARM ATLLAGLPQS VSGTTINRLC GSGLDALGFA ARAIKAGDGD LLIAGGVESM 
SRAPFVMGKA TSAFSRQAEM FDTTIGWRFV NPLMAQQFGT DSMPETAENV AELLKISRED 
QDSFALRSQQ RSAKAQSSGI LAEEIVPVVL KNKKGVVTEI QHDEHLRPET TLEQLRGLKA 
PFRANGVITA GNASGVNDGA AALIIASEQM AAAQGLTPRA RIVAMATAGV EPRLMGLGPV 
PATRRVLERA GLSIHDMDVI ELNEAFAAQA LGVLRELGLP DDAPHVNPNG GAIALGHPLG 
MSGARLALAA SHELHRRNGR YALCTMCIGV GQGIAMILER V