Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1422 |
Symbol | pspD |
ID | 5592320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1416844 |
End bp | 1417065 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640920577 |
Product | peripheral inner membrane phage-shock protein |
Protein accession | YP_001458136 |
Protein GI | 157160818 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02979] phage shock protein PspD |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTC GCTGGCAACA GGCCGGGCAA AAGGTAAAGC CTGGTTTCAA ATTAGCAGGC AAGCTGGTAC TTCTTACCGC ACTGCGCTAT GGCCCAGCGG GTGTGGCGGG CTGGGCGATA AAATCAGTTG CTCGCCGACC GCTGAAAATG TTGCTGGCTG TGGCGCTGGA ACCGCTGTTA AGTCGGGCTG CCAATAAACT GGCGCAGCGT TATAAAAGGT GA
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Protein sequence | MNTRWQQAGQ KVKPGFKLAG KLVLLTALRY GPAGVAGWAI KSVARRPLKM LLAVALEPLL SRAANKLAQR YKR
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