Gene EcHS_A1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1318 
Symbol 
ID5593792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1315363 
End bp1315755 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID640920475 
Productputative transcriptional regulator 
Protein accessionYP_001458036 
Protein GI157160718 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0000067182 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTT TTTCTACACT GCTTAGTGTT CATCTTATTA GTATCGCGCT TTCTGTTGGG 
CTATTAACCT TACGTTTCTG GCTACGTTAT CAGAAGCATC CACAGGCATT TGCTCGCTGG
ACGCGCATTG TGCCGCCGGT TGTCGATACG CTGTTACTGT TAAGCGGCAT TGCGTTGATG
GCTAAAGCGC ACATCCTGCC ATTTTCCGGG CAGGCACAGT GGCTGACTGA AAAGCTGTTT
GGAGTTATCA TTTATATCGT TTTGGGTTTT ATTGCACTCG ATTATCGTCG TATGCACAGT
CAGCAGGCGC GCATTATTGC CTTCCCGCTG GCGTTGGTGG TGCTGTACAT CATCATTAAA
CTCGCCACCA CAAAAGTACC GTTACTGGGG TAA
 
Protein sequence
MTSFSTLLSV HLISIALSVG LLTLRFWLRY QKHPQAFARW TRIVPPVVDT LLLLSGIALM 
AKAHILPFSG QAQWLTEKLF GVIIYIVLGF IALDYRRMHS QQARIIAFPL ALVVLYIIIK
LATTKVPLLG