Gene EcHS_A1309 details

Gene Information

• Locus tag: EcHS_A1309
• Symbol: pth
• ID: 5594069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 1306368
• End bp: 1306952
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640920466
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_001458027
• Protein GI: 157160709
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.00563247
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGATTA AATTGATTGT CGGCCTGGCG AACCCCGGTG CTGAATACGC CGCAACGCGA 
CATAATGCTG GTGCCTGGTT CGTTGACTTA CTGGCAGAGC GTTTGCGCGC TCCGCTGCGC 
GAAGAGGCTA AATTCTTTGG TTATACTTCG CGAGTCACTC TTGGAGGCGA AGATGTCCGC 
CTGTTAGTCC CGACTACATT TATGAATCTC AGCGGCAAAG CCGTTGCGGC GATGGCCAGT 
TTTTTCCGCA TTAATCCGGA CGAAATTCTG GTGGCCCACG ACGAACTGGA TCTGCCTCCT 
GGCGTCGCCA AATTTAAATT GGGCGGTGGC CATGGTGGTC ACAATGGACT GAAAGACATC 
ATCAGTAAAT TGGGTAATAA CCCTAACTTT CACCGTTTAC GCATCGGAAT CGGTCATCCG 
GGCGATAAAA ATAAAGTTGT CGGTTTTGTG TTAGGCAAAC CGCCTGTTAG TGAACAGAAG 
TTAATTGATG AAGCCATTGA CGAAGCGGCG CGTTGTACTG AAATGTGGTT TACAGATGGC 
TTGACCAAAG CAACGAACCG ATTGCACGCC TTTAAAGCGC AATAA 

 

Protein sequence

MTIKLIVGLA NPGAEYAATR HNAGAWFVDL LAERLRAPLR EEAKFFGYTS RVTLGGEDVR 
LLVPTTFMNL SGKAVAAMAS FFRINPDEIL VAHDELDLPP GVAKFKLGGG HGGHNGLKDI 
ISKLGNNPNF HRLRIGIGHP GDKNKVVGFV LGKPPVSEQK LIDEAIDEAA RCTEMWFTDG 
LTKATNRLHA FKAQ