Gene EcHS_A1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1227 
Symbol 
ID5593797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1225927 
End bp1226304 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content50% 
IMG OID640920387 
Productputative lipoprotein 
Protein accessionYP_001457949 
Protein GI157160631 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0447806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG GATGCTTTGG GCTGGTGTCT CTGGCGTTGT TACTGCTGGT GGGCTGTCGT 
TCACATCCGG AAATTCCGGT GAATGATGAG CAATCGCTGG TGATGGAGTC ATCTTTATTG
GCTGCGGGCA TCAGTGCAGA AAAGCCCGTC CTTTCGACGT CTGATATTCA ACCTTCAGCA
TCCTCAACGC TTTATAACGA AAGGCAAGAA CCCATTACCG TTCATTATCG TTTTTACTGG
TATGACGCCA GAGGGCTGGA GATGCATCCT CTGGAAAGGC CACGCAGCGT TACCATTCCC
GCACATTCGG CGGTAACGCT GTACGGCAGC GCCAATTTTC TGGGGGCGCA CAAAGTCAGA
CTTTATCTAT ATTTGTAA
 
Protein sequence
MRKGCFGLVS LALLLLVGCR SHPEIPVNDE QSLVMESSLL AAGISAEKPV LSTSDIQPSA 
SSTLYNERQE PITVHYRFYW YDARGLEMHP LERPRSVTIP AHSAVTLYGS ANFLGAHKVR
LYLYL