| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0943 |
|---|
| Symbol | |
|---|
| ID | 5593653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 942234 |
|---|
| End bp | 942749 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640920113 |
|---|
| Product | phage major tail tube protein |
|---|
| Protein accession | YP_001457680 |
|---|
| Protein GI | 157160362 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3498] Phage tail tube protein FII |
|---|
| TIGRFAM ID | [TIGR01611] phage contractile tail tube protein, P2 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAC CACGCAAATT AAAACACCTG AACCTGTTTA ATGACGGGAA CAACTGGCAG
GGGATCGTTG AGTCGCTGAC GCTGCCGAAA TTCACCCGCA AATATGAGAA GTATCGCGGC
GGTGGAATGC CGGGTGCAGT GGATGTGGAT CTGGGGCTTG ATGACAGTGC GCTGGACACA
GAATTTTCCA TTGGTGGTAC TGAACTGCTG CTGTTTAAAC AGATGGGCAA AGCCACGGTG
GATGGCATCC AGTTGCGCTT CACCGGCTCT ATCCAGCGTG ACGATACCGG AGAAGTGCAG
GCCGTGGAGC TTGTGGTGCG TGGACGTCAC AAAGAAGTGG ATTCCGGCGA GTGGAAGACG
GGCGAAAGCA ACACCACCAA AGTGACCAGT ACCAACAGCT ACGCGAAGCT GACTATCAAT
GGTGAGGTGC TCTATGAAGT GGACCTTATC AACATGGTGG AAATTGTGGA CGGTGTGGAC
CTGATGGAAG CGCACCGCAA CGCCCTCGGC CTCTGA
|
|---|
| Protein sequence | MALPRKLKHL NLFNDGNNWQ GIVESLTLPK FTRKYEKYRG GGMPGAVDVD LGLDDSALDT
EFSIGGTELL LFKQMGKATV DGIQLRFTGS IQRDDTGEVQ AVELVVRGRH KEVDSGEWKT
GESNTTKVTS TNSYAKLTIN GEVLYEVDLI NMVEIVDGVD LMEAHRNALG L
|
|---|
| |