Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4975 |
Symbol | |
ID | 5588929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4951756 |
End bp | 4952829 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640928574 |
Product | patatin family phospholipase |
Protein accession | YP_001465898 |
Protein GI | 157156545 |
COG category | [R] General function prediction only |
COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.065894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCAGC GAATACCTGT AACGCTTGGT AATATTGCGC CGTTGTCGCT AAGGCCGTTC CAGCCTGGAC GAATAGCTCT GGTGTGCGAA GGCGGCGGGC AGCGTGGAAT TTTCACGGCT GGCGTGCTGG ATGAGTTTAT GCGCGCGCAG TTTAATCCTT TCGATCTTTA TCTCGGCACA TCTGCCGGGG CGCAGAACCT CTCGGCGTAT ATCTGCAATC AGCCCGGTTA CGCGCGCAAA GTCATCATGC GCTATACCAC AAAACGCGAA TTTTTCGATC CATTGCGCTT TGTGCGTGGA GGAAATCTTA TCGATCTCGA CTGGCTGGTG GAGGCCACCG CAAGTCAGAT GCCGTTGCAA ATGGATACCG CCGCGCGGTT GTTTGACAGC GGCAAATCGT TTTATATGTG CGCCTGTCGT CAGGATGACT ATGCGCCGAA TTACTTTTTA CCAACCAAAC AAAACTGGCT GGATGTGATT CGCGCCTCCA GTGCGATACC TGGCTTTTAT CGTAGCGGAG TGTCGCTGGA AGGCATTAAC TACCTGGATG GCGGGATCAG TGATGCGATT CCGGTTAAAG AGGCGGCAAG GCAGGGCGCT AAAACGTTGG TCGTCATTCG CACTGTGCCG TCACAAATGT ACTACACGCC GCAGTGGTTC AAACGCATGG AACGCTGGCT GGGTGACAGT AGCCTGCAGC CGCTGGTCAA TCTGGTGCAG CATCATGAAA CCAGCTATCG TGACATCCAG CAATTTATTG AGAAACCACC GGGCAAGCTG CGGATATTCG AAATTTATCC ACCGAAGCCA TTACATAGTA TCGCGCTTGG CAGTCGGATT CCGGCGCTGC GTGAAGACTA TAAACTTGGG CGTTTATGCG GGCGATATTT CCTCGCCACG GTTGGCAAGC TATTAACTGA AAAAGCGCCG CTTACCCGCC ATCTGGTGCC AGTGGTGACG CCGGAATCGA TCGTTATTCC GCCTGCGCCA GTCGCCAACG ATACGCTGGT TGCCGAAGTG AGCGATGCTC CGCAGGCGAA CGACCCGACA TTTAACAATG AGGATCTGGC TTGA
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Protein sequence | MGQRIPVTLG NIAPLSLRPF QPGRIALVCE GGGQRGIFTA GVLDEFMRAQ FNPFDLYLGT SAGAQNLSAY ICNQPGYARK VIMRYTTKRE FFDPLRFVRG GNLIDLDWLV EATASQMPLQ MDTAARLFDS GKSFYMCACR QDDYAPNYFL PTKQNWLDVI RASSAIPGFY RSGVSLEGIN YLDGGISDAI PVKEAARQGA KTLVVIRTVP SQMYYTPQWF KRMERWLGDS SLQPLVNLVQ HHETSYRDIQ QFIEKPPGKL RIFEIYPPKP LHSIALGSRI PALREDYKLG RLCGRYFLAT VGKLLTEKAP LTRHLVPVVT PESIVIPPAP VANDTLVAEV SDAPQANDPT FNNEDLA
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