Gene EcE24377A_4783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4783 
SymbolcpdB 
ID5586786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand- 
Start bp4775100 
End bp4777043 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content50% 
IMG OID640928393 
Productbifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 
Protein accessionYP_001465721 
Protein GI157154929 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID[TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.311909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGT TTAGCGCAAC GCTCCTGGCC ACGCTGATTG CCGCCAGTGT GAATGCAGCG 
ACGGTCGATC TGCGTATCAT GGAAACCACT GATCTGCATA GCAACATGAT GGATTTCGAT 
TATTACAAAG ACACCGCCAC GGAAAAGTTC GGACTGGTAC GCACCGCAAG CCTGATTAAC 
GATGCCCGCA ATGAAGTCAA AAATAGCGTA CTGGTCGATA ACGGCGACTT GATCCAGGGG 
AGTCCGCTGG CAGATTACAT GTCGGCGAAA GGATTAAAAG CAGGTGATAT TCACCCAGTG 
TATAAGGCAT TAAATACGCT GGACTATACC GTCGGCACGC TTGGCAACCA TGAGTTTAAC 
TACGGTCTGG ATTACCTGAA AAATGCGCTG GCGGGAGCGA AATTCCCTTA TGTAAATGCC 
AACGTCATTG ACGCCAGAAC CAAACAGCCA ATGTTTACAC CGTATTTAAT TAAAGACACC 
GAAGTGGTCG ATAAAGACGG AAAAAAACAG ACGCTGAAGA TTGGCTATAT TGGCGTCGTA 
CCGCCGCAAA TCATGGGCTG GGATAAAGCT AATTTATCCG GGAAAGTGAC GGTGAATGAT 
ATTACCGAAA CCGTGCGCAA ATACGTGCCT GAAATGCGCG AGAAAGGTGC CGATCTCGTT 
GTCGTTCTGG CGCATTCCGG GCTGTCTGCC GATCCGTATA AAGTGATGGC GGAAAACTCA 
GTTTATTATC TCAGTGAAAT TCCGGGTGTT GACGCCATTA TGTTTGGCCA TGCTCACGCC 
GTTTTCCCAA GTAAAGATTT TGCTGATATC GAAGGAGCTG ATATCGCGAA AGGCACGCTG 
AATGGTGTTC CGGCGGTAAT GCCAGGCATG TGGGGCGATC ATCTTGGTGT GGTCGACTTA 
CAACTCAGTA ATGACAGCGG TAAATGGCAG GTGACGCAGG CGAAAGCGGA AGCTCGGCCG 
ATTTACGACA TCGCCAATAA AAAATCCCTC GCGGCGGAAG ACAGCAAGCT GGTAGAAACA 
CTCAAAGCCG ATCACGATGC CACACGCCAG TTCGTCAGCA AGCCAATCGG TAAATCTGCC 
GACAATATGT ATAGCTATCT GGCGCTGGTG CAGGACGATC CGACCGTGCA AGTAGTGAAC 
AACGCGCAAA AAGCGTATGT CGAACATTAC ATTCAGGGCG ATCCGGATCT GGCAAAACTG 
CCGGTGCTTT CAGCTGCCGC ACCGTTTAAA GTTGGTGGTC GCAAAAATGA CCCGGCAAGC 
TATGTGGAGG TGGAAAAAGG CCAGTTGACC TTCCGTAATG CCGCCGATCT TTATCTCTAC 
CCCAATACGC TGATTGTAGT GAAAGCCAGC GGTAAAGAGG TGAAAGAGTG GCTGGAGTGC 
TCCGCCGGAC AGTTTAACCA GATTGATCCT AACAGCACGA AACCGCAATC ACTCATCAAC 
TGGGATGGTT TCCGCACCTA TAACTTTGAT GTGATTGATG GTGTGAATTA TCAGATTGAT 
GTTACCCAGC CTGCCCGTTA TGACGGCGAG TGCCAGATGA TTAATGCCAA TGCGGAAAGG 
ATTAAGAACC TGACCTTTAA TGGCAAGCCG ATTGATCCGA ACGCCATGTT CCTCGTTGCC 
ACCAATAACT ATCGCGCTTA CGGCGGCAAA TTTGCCGGTA CGGGCGACAG CCATATCGCT 
TTTGCTTCAC CGGATGAGAA CCGCTCGGTG CTGGCAGCGT GGATTGCTGA TGAGTCGAAA 
CGTGCGGGGG AAATTCACCC GGCGGCAGAT AACAACTGGC GTTTAGCACC GATTGCTGGC 
GATAAGAAAC TGGATATCCG TTTCGAAACT TCCCCGTCAG ATAAAGCCGC AGCGTTTATT 
AAAGAGAAAG GGCAATATCC GATGAATAAA GTCGCGACCG ATGATATCGG GTTTGCGATT 
TATCAGGTGG ATTTGAGTAA GTAA
 
Protein sequence
MIKFSATLLA TLIAASVNAA TVDLRIMETT DLHSNMMDFD YYKDTATEKF GLVRTASLIN 
DARNEVKNSV LVDNGDLIQG SPLADYMSAK GLKAGDIHPV YKALNTLDYT VGTLGNHEFN 
YGLDYLKNAL AGAKFPYVNA NVIDARTKQP MFTPYLIKDT EVVDKDGKKQ TLKIGYIGVV 
PPQIMGWDKA NLSGKVTVND ITETVRKYVP EMREKGADLV VVLAHSGLSA DPYKVMAENS 
VYYLSEIPGV DAIMFGHAHA VFPSKDFADI EGADIAKGTL NGVPAVMPGM WGDHLGVVDL 
QLSNDSGKWQ VTQAKAEARP IYDIANKKSL AAEDSKLVET LKADHDATRQ FVSKPIGKSA 
DNMYSYLALV QDDPTVQVVN NAQKAYVEHY IQGDPDLAKL PVLSAAAPFK VGGRKNDPAS 
YVEVEKGQLT FRNAADLYLY PNTLIVVKAS GKEVKEWLEC SAGQFNQIDP NSTKPQSLIN 
WDGFRTYNFD VIDGVNYQID VTQPARYDGE CQMINANAER IKNLTFNGKP IDPNAMFLVA 
TNNYRAYGGK FAGTGDSHIA FASPDENRSV LAAWIADESK RAGEIHPAAD NNWRLAPIAG 
DKKLDIRFET SPSDKAAAFI KEKGQYPMNK VATDDIGFAI YQVDLSK