Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4638 |
Symbol | mdtO |
ID | 5585952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4639545 |
End bp | 4641596 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640928253 |
Product | multidrug efflux system protein MdtO |
Protein accession | YP_001465585 |
Protein GI | 157158319 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC TCAACTCCCT GCCATTACCG GTGGTCAGGC TGCTGGCGTT CTTTCATGAA GAGTTAAGCG AGCGGCGACC AGGCCGCGTG CCGCAGACCG TGCAACTCTG GGTAGGCTGC CTGCTGGTGA TTCTGATCTC GATGACCTTT GAGATCCCAT TCGTGGCGTT ATCGCTGGCA GTGCTGTTTT ACGGTATTCA GTCGAACGCG TTTTACACCA AATTTGTCGC GATCTTATTT GTGGTCGCCA CGATGCTGGA GATCGGCAGC CTGTTTTTGA TCTACAAATG GTCATACGGC GAACCGTTGA TCCGATTGAT CATCGCCGGG CCGATCCTGA TGGGCTGTAT GTTTTTGATG CGCACCCATC GGCTGGGACT GGTCTTTTTC GCAGTCGCCA TTGTCGCCAT TTACGGGCAA ACCTTCCCCG CCATGCTCGA CTATCCGGAA GTGGTCGTGC GCTTAACGCT GTGGTGTATC GTTGTTGGCC TTTATCCAAC CTTGCTGATG ACGTTAATCG GCGTGCTGTG GTTTCCCAGT CGTGCCATTT CGCAAATGCA TCAGGCGCTT AATGATCGGC TTGATGATGC CATTAGCCAC CTGACGGACA GCCTCGCACC GCTACCCGAA ACGCGGATTG AAAGAGAGGC GCTGGCGCTG CAAAAACTGA ATGTCTTTTG TCTCGCGGAC GATGCCAACT GGCGAACTCA AAGCGCATGG TGGCAAAGCT GCGTGGCAAC GGTAACCTAC ATTTACTCGA CGCTGAATCG CTACGATCCC ACCTCTTTTG CTGATTCTCA GGCAATTATT GAATTTCGGC AAAAATTAGC CTCAGAAATC AATAAGCTGC AGCATGCCGT TGCTGAAGGT CAGTGCTGGC AAAGCGACTG GCGGATCAGT GAAAGTGAAG CGATGGCGGC ACGGGAATGT AACCTGGAGA ATATCTGCCA GACGTTGTTA CAACTGGGTC AGATGGACCC GAATACGCCG CCAACGCCCG CAGCCAAACC GCCATCAATG GCCGCCGATG CTTTTACCAA TCCAGACTAT ATGCGCTACG CGGTAAAAAC GCTGCTCGCC TGTTTGATCT GTTACACCTT TTACAGCGGC GTGGACTGGG AAGGCATTCA CACCTGTATG CTGACATGCG TGATCGTCGC TAACCCAAAT GTCGGTTCGT CGTACCAGAA GATGGTGCTG CGTTTTGGCG GGGCCTTTTG CGGCGCGATT CTGGCGCTGT TATTCACGCT ACTGGTCATG CCCTGGCTGG ACAATATTGT CGAATTGCTG TTTGTGCTGG CACCGATTTT CCTGTTGGGC GCATGGATTG CCACCAGCTC TGAACGCTCT TCTTATATCG GCACACAGAT GGTGGTCACC TTCGCGCTCG CCACGCTCGA AAACGTTTTT GGCCCAGTGT ACGACCTGGT GGAAATTCGC GATCGCGCCC TGGGTATCAT CATTGGTACC GTGGTGTCCG CGGTGATTTA CACCTTTGTC TGGCCTGAAA GTGAAGCGCG CACACTGCCG CAAAAACTGG CTGGCACGCT GGGTATGTTA AGTAAAGTAA TGCGGATCCC ACGCCAGCAG GAAGTCACGG CTCTGCGCAC TTATCTGCAA ATTCGTATCG GTCTGCATGC GGCGTTTAAT GCCTGTGAAG AGATGTGCCA ACGCGTGGCG CTGGAGCGTC AACTGGACAG CGAAGAACGC GCCTTACTGA TTGAACGTTC GCAAACGGTT ATTCGTCAGG GCCGCGATAT TCTTCACGCC TGGGATGCCA CCTGGAACTC GGCGCAGGCG CTGGATAACG CACTACAGCC GGACAGAGCA GCTCAGTTTG CCGACGCCCT GGAGAAATAC GCTGCCGGTC TGGCAACCGC ACTCAGCCGT TCTCCTCAAA TAACGCTTGA AGAGACACCC GCCTCGCAGG CCATCCTGCC CACCTTATTA AAACAGGAGC AACACGTCTG CCAGCTTTTC GCCCGCTTGC CAGACTGGAC AGCCCCGGCA TTAACGCCCG CCACGGAACA GGCACAAGGA GCCACGCAAT GA
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Protein sequence | MSALNSLPLP VVRLLAFFHE ELSERRPGRV PQTVQLWVGC LLVILISMTF EIPFVALSLA VLFYGIQSNA FYTKFVAILF VVATMLEIGS LFLIYKWSYG EPLIRLIIAG PILMGCMFLM RTHRLGLVFF AVAIVAIYGQ TFPAMLDYPE VVVRLTLWCI VVGLYPTLLM TLIGVLWFPS RAISQMHQAL NDRLDDAISH LTDSLAPLPE TRIEREALAL QKLNVFCLAD DANWRTQSAW WQSCVATVTY IYSTLNRYDP TSFADSQAII EFRQKLASEI NKLQHAVAEG QCWQSDWRIS ESEAMAAREC NLENICQTLL QLGQMDPNTP PTPAAKPPSM AADAFTNPDY MRYAVKTLLA CLICYTFYSG VDWEGIHTCM LTCVIVANPN VGSSYQKMVL RFGGAFCGAI LALLFTLLVM PWLDNIVELL FVLAPIFLLG AWIATSSERS SYIGTQMVVT FALATLENVF GPVYDLVEIR DRALGIIIGT VVSAVIYTFV WPESEARTLP QKLAGTLGML SKVMRIPRQQ EVTALRTYLQ IRIGLHAAFN ACEEMCQRVA LERQLDSEER ALLIERSQTV IRQGRDILHA WDATWNSAQA LDNALQPDRA AQFADALEKY AAGLATALSR SPQITLEETP ASQAILPTLL KQEQHVCQLF ARLPDWTAPA LTPATEQAQG ATQ
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