| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4621 |
|---|
| Symbol | |
|---|
| ID | 5590413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 4620866 |
|---|
| End bp | 4622158 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640928237 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001465569 |
|---|
| Protein GI | 157158802 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATA ATGGTTTAAA TAATATGTTT TTCTCTCTTT GCCAGATTAA CGATAACCAC
TCTCTCACAA GTTCATCACA TACAAAGAAA ACAAAATCAT ATAATTACAG CAAACATCAT
AAAAACACGT TAATTGACAA TAAAGCCCTC TCTCTTTTCA AAATGGATGA TCATGAAAAA
GTGATAGGTT TGATTCAGAA AATGAAAAGA ATTTATGATA GTTTACCATC AGGAAAAATC
ACGAAGGAAA CGGACAGGAA AATACATAAA CATTTTATAG ATATAGCTTT ATATGCAAAT
AATAAATGTG ACGATAGAAT TACGAGAAGA GTTTACCTTA GTAAAGAAAA GGAAGTATCC
ATTAAGGTGG TATATTTTAT AAATAATGTC GCCGCCCATA ATAATACTAT CGAAATTCCA
CAGACAGTAA ATGGTGGTTA CGATTTTTCA CACCTTAGCC TGAAAGGTAT CGTGATTAAA
GATGAAGATT TATCCAATTC GAATTTTGCA GGTTGCAGAC TACAAAACGC TATTTTCCAG
GACTGTAATA TGTATAAAAC GAATTTTTAT TACGCCATAA TGGAAAAAAT ACTTTTTGAT
AATTGTATTC TCGATGACTC AAATTTCGCT CAGATAAAAA TGGCCGACGG AACTCTAAAT
GCATGCTCCG CTATGCATGT TCAATTCTAC AATGCAGCAA TGAATAGAGC CAATATTAAA
AACACCTTCC TTGACTATTC AAATTTTTAT ATGGCGTACA TGGCTGAGGT AAATCTTTAT
AAAGTAATAG CGCCATATGT TAATTTATTT AAAGCCGACC TTAGTTTCTC TAAACTCGAT
TTAATTAACT TTGAACATGC TGATCTGTCT CGCGTCAATC TGAACAAAGC AATCCTCCAG
AATATAAACT TAATTGATAG CAAACTCTTT TGTACGTGGC TGACAAATAC ATTCCTCGAA
ATGGTTATAT GTACCGGCTC TAATATGGCT AATGTTAATT TTAATAATGC CAATTTAAGC
AACTGCCATT TCAACTGTTC TATTTTAACA AAAGCCTGTA TGTTTAATAC CCGTCTCTAT
CGGGTTAATT TTGATGAGGC TAGCGTCCAG GGAATGGGCA TTTCCATTCT CCGTGGGGAG
GAAAATATCC CCATTGATAG TGATACCCTG GTAACACTAC AGAAATTCTT TGAAGAAGAT
TGTACCTCTC ATACTGGCAT GTCACAAACT GAGGATAATA TTAATGCAGT CGCTATGAAG
ATTACTGCAG ATATTATGCA ACACGCAGAT TGA
|
|---|
| Protein sequence | MRYNGLNNMF FSLCQINDNH SLTSSSHTKK TKSYNYSKHH KNTLIDNKAL SLFKMDDHEK
VIGLIQKMKR IYDSLPSGKI TKETDRKIHK HFIDIALYAN NKCDDRITRR VYLSKEKEVS
IKVVYFINNV AAHNNTIEIP QTVNGGYDFS HLSLKGIVIK DEDLSNSNFA GCRLQNAIFQ
DCNMYKTNFY YAIMEKILFD NCILDDSNFA QIKMADGTLN ACSAMHVQFY NAAMNRANIK
NTFLDYSNFY MAYMAEVNLY KVIAPYVNLF KADLSFSKLD LINFEHADLS RVNLNKAILQ
NINLIDSKLF CTWLTNTFLE MVICTGSNMA NVNFNNANLS NCHFNCSILT KACMFNTRLY
RVNFDEASVQ GMGISILRGE ENIPIDSDTL VTLQKFFEED CTSHTGMSQT EDNINAVAMK
ITADIMQHAD
|
|---|
| |