| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4452 |
|---|
| Symbol | cdh |
|---|
| ID | 5590584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4437603 |
|---|
| End bp | 4438358 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640928067 |
|---|
| Product | CDP-diacylglycerol pyrophosphatase |
|---|
| Protein accession | YP_001465411 |
|---|
| Protein GI | 157155539 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2134] CDP-diacylglycerol pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00672] CDP-diacylglycerol pyrophosphatase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CGGGTCTTCT TTTTTTGGTG ATGATAGTTA TCGCCGTTGT GGCTGCCGGT
ATTGGTTACT GGAAATTAAC CGGTGAAGAG TCGGATACAT TACGTAAGAT TGTCCTTGAG
GAATGTTTGC CCAATCAGCA GCAAAATCAA AATCCTTCGC CATGTGCGGA AGTCAAACCC
AATGCCGGAT ACGTGGTTTT AAAAGATCTT AATGGTCCAC TGCAATATCT GTTGATGCCA
ACGTATCGTA TTAACGGTAC TGAAAGTCCT TTGTTGACCG ATCCTTCAAC GCCGAACTTC
TTTTGGTTGG CCTGGCAGGC GCGTGATTTT ATGAGCAAAA AATACGGCCA GCCGGTTCCC
GATCGCGCGG TTTCTTTGGC GATCAACTCC CGCACCGGGC GTACGCAAAA CCATTTTCAT
ATTCATATCT CTTGTATTCG TCCTGATGTG CGCGAACAAC TGGATAACAA TCTGGCGAAC
ATCAGCAGCC GCTGGTTGCC ACTGCCAGGT GGTTTGCGCG GGCATGAATA CCTGGCGCGT
CGGGTAACGG AAAGCGAACT GGTACAACGC AGCCCATTTA TGATGCTGGC AGAAGAAGTA
CCTGAGGCGC GGGAACATAT GGGAAGCTAC GGGCTGGCGA TGGTACGGCA GAGTGATAAC
TCATTTGTAT TGCTGGCGAC ACAACGAAAT CTACTGACGC TTAACCGTGC TTCAGCCGAG
GAAATTCAGG ATCATCAGTG TGAGATTTTG CGTTAA
|
|---|
| Protein sequence | MKKAGLLFLV MIVIAVVAAG IGYWKLTGEE SDTLRKIVLE ECLPNQQQNQ NPSPCAEVKP
NAGYVVLKDL NGPLQYLLMP TYRINGTESP LLTDPSTPNF FWLAWQARDF MSKKYGQPVP
DRAVSLAINS RTGRTQNHFH IHISCIRPDV REQLDNNLAN ISSRWLPLPG GLRGHEYLAR
RVTESELVQR SPFMMLAEEV PEAREHMGSY GLAMVRQSDN SFVLLATQRN LLTLNRASAE
EIQDHQCEIL R
|
|---|
| |