| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4433 |
|---|
| Symbol | rhaD |
|---|
| ID | 5590040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 4421330 |
|---|
| End bp | 4422154 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640928048 |
|---|
| Product | rhamnulose-1-phosphate aldolase |
|---|
| Protein accession | YP_001465392 |
|---|
| Protein GI | 157156798 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACA TTACCCAGTC CTGGTTTGTC CAGGGAATGA TCAAAGCCAC CACCGATGCC
TGGCTGAAAG GCTGGGACGA GCGCAACGGC GGCAACCTGA CGCTGCGCCT GGATGACGCC
GATATCGCGC CTTATAAAGA CAACTTCCAT GCACAACCGC GCTATATCCC GCTCAGCCAG
CCCATGCCTT TACTGGCAAA TACACCGTTT ATTGTCACCG GCTCCGGCAA ATTCTTCCGT
AACGTCCAGC TTGATCCTGC AGCTAACTTA GGCGTCGTAA AAGTCGACAG CGACGGCGCG
GGCTACCATA TTCTCTGGGG GTTAACCAAC GAAGCCGTTC CAACTTCTGA ACTTCCGGCT
CACTTTCTCT CCCACTGCGA GCGCATTAAA GCCACCAACG GTAAAGATCG GGTGATCATG
CACTGCCACG CCACCAACCT GATCGCCCTC ACCTATGTAC TGGAAAACGA CACCGCGGTC
TTTACTCGCC AACTGTGGGA AGGCAGCACC GAGTGTCTGG TGGTATTCCC GGATGGCGTT
GGCATTCTGC CGTGGATGGT GCCCGGCACG GACGAAATCG GCCAGGCGAC CGCACAAGAG
ATGCAAAAAC ATTCGCTGGT GTTGTGGCCC TTCCACGGCG TCTTCGGCAG CGGGTCGACG
TTGGATGAAA CATTCGGTTT AATCGACACC GCAGAAAAAT CAGCACAAGT ATTAGTGAAG
GTTTATTCGA TGGGCGGCAT GAAACAGACC ATCAGCCGTG AAGAGTTGAT AGCGCTCGGC
AAGCGCTTCG GCGTTACACC ACTAGCCAGT GCGCTGGCGC TGTAA
|
|---|
| Protein sequence | MQNITQSWFV QGMIKATTDA WLKGWDERNG GNLTLRLDDA DIAPYKDNFH AQPRYIPLSQ
PMPLLANTPF IVTGSGKFFR NVQLDPAANL GVVKVDSDGA GYHILWGLTN EAVPTSELPA
HFLSHCERIK ATNGKDRVIM HCHATNLIAL TYVLENDTAV FTRQLWEGST ECLVVFPDGV
GILPWMVPGT DEIGQATAQE MQKHSLVLWP FHGVFGSGST LDETFGLIDT AEKSAQVLVK
VYSMGGMKQT ISREELIALG KRFGVTPLAS ALAL
|
|---|
| |