Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3710 |
Symbol | sspB |
ID | 5587725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3706364 |
End bp | 3706861 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640927334 |
Product | ClpXP protease specificity-enhancing factor |
Protein accession | YP_001464701 |
Protein GI | 157157016 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000520481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTGT CACAGCTAAC ACCACGTCGT CCCTATCTGC TGCGTGCATT CTATGAGTGG TTGCTGGATA ACCAGCTCAC GCCGCACCTG GTGGTGGATG TGACGCTCCC TGGCGTGCAG GTTCCTATGG AATATGCGCG TGACGGGCAA ATCGTACTCA ACATTGCGCC GCGTGCTGTC GGCAATCTGG AACTGGCGAA TGATGAGGTA CGCTTTAACG CGCGCTTTGG TGGCATTCCG CGTCAGGTTT CTGTGCCGCT GGCTGCCGTG CTGGCTATCT ACGCCCGTGA AAATGGCGCA GGCACGATGT TTGAGCCTGA AGCTGCCTAC GATGAAGATA CCAGCATCAT GAATGATGAA GAGGCATCGG CAGACAACGA AACCGTTATG TCGGTTATTG ATGGCGACAA GCCAGATCAC GATGATGACA CTCATCCTGA CGATGAACCT CCGCAGCCAC CACGCGGTGG TCGACCGGCA TTACGCGTTG TGAAGTAA
|
Protein sequence | MDLSQLTPRR PYLLRAFYEW LLDNQLTPHL VVDVTLPGVQ VPMEYARDGQ IVLNIAPRAV GNLELANDEV RFNARFGGIP RQVSVPLAAV LAIYARENGA GTMFEPEAAY DEDTSIMNDE EASADNETVM SVIDGDKPDH DDDTHPDDEP PQPPRGGRPA LRVVK
|
| |