Gene EcE24377A_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3246 
Symbol 
ID5589211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3267680 
End bp3268465 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID640926884 
Productmethylmalonyl-CoA decarboxylase 
Protein accessionYP_001464256 
Protein GI157158191 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTATC AGTATGTTAA CGTTGTCACT ATCAACAAAG TGGCGGTCAT TGAGTTTAAC 
TATGGCCGCA AACTTAATGC CTTAAGTAAA GTCTTTATTG ATGATCTTAT GCAGGCATTA
AGCGATCTCA ACCGGCCGGA AATTCGCTGT ATCATTTTGC GCGCGCCGAG TGGATCCAAA
GTCTTCTCCG CAGGCCACGA TATTCACGAA CTGCCGTCTG GCGGTCGCGA TCCGCTCTCC
TATGATGATC CATTGCGTCA AATCACCCGC ATGATCCAAA AATTCCCGAA ACCGATCATT
TCGATGGTGG AAGGTAGTGT TTGGGGTGGC GCATTTGAAA TGATCATGAG TTCCGATCTG
ATTATCGCCG CCAGTACCTC AACCTTCTCA ATGACGCCTG TAAACCTCGG CGTCCCGTAT
AACCTGGTCG GCATTCACAA CCTGACCCGC GACGCGGGCT TCCACATTGT CAAAGAACTG
ATTTTTACCG CTTCGCCAAT CACCGCCCAG CGCGCGTTGG CTGTCGGCAT CCTCAACCAT
GTTGTGGAAG TGGAAGAACT GGAAGATTTC ACCTTACAAA TGGCGCACCA CATCTCTGAG
AAAGCGCCGT TAGCCATTGC TGTTATCAAA GAAGAGCTGC GTGTACTGGG CGAAGCGCAC
ACCATGAACT CCGATGAATT TGAACGTATT CAGGGGATGC GCCGCGCGGT TTATGACAGC
GAAGATTACC AGGAAGGGAT GAACGCTTTC CTCGAAAAAC GTAAACCTAA TTTCGTTGGT
CATTAA
 
Protein sequence
MSYQYVNVVT INKVAVIEFN YGRKLNALSK VFIDDLMQAL SDLNRPEIRC IILRAPSGSK 
VFSAGHDIHE LPSGGRDPLS YDDPLRQITR MIQKFPKPII SMVEGSVWGG AFEMIMSSDL
IIAASTSTFS MTPVNLGVPY NLVGIHNLTR DAGFHIVKEL IFTASPITAQ RALAVGILNH
VVEVEELEDF TLQMAHHISE KAPLAIAVIK EELRVLGEAH TMNSDEFERI QGMRRAVYDS
EDYQEGMNAF LEKRKPNFVG H