Gene EcE24377A_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2634 
Symbol 
ID5586835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2625603 
End bp2626166 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID640926291 
Productfimbrial protein 
Protein accessionYP_001463685 
Protein GI157156367 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGT TTGTTAAAAC AGCTATTGCT GCGGCAATGG TGATGGGCGC GTTCACCTCT 
ACGGCAACAA TCGCTGCGGG TAACAACGGT ACTGCACGTT TTTACGGCAC CATTGAAGAC
TCAGTGTGTT CTATCGTCCC GGACGATCAC AAACTGGAAG TTGATATGGG TGATATCGGT
GCCGAAAAAC TGAAAAATAA CGGCACCACC ACGCCGAAAA GTTTCCAGAT TCGTCTGCAA
GATTGCGTAT TTGATACTCA GGAAACAATG ACTACTACCT TTACTGGTAC CGTTTCTTCT
GCAAATAGCG GCAATTATTA CACCATTTTC AATACCGATA CCGGTGCGGC ATTTAACAAT
GTTAGCCTGG CGATCGGTGA CTCTCTGGGT ACCTCTTACA AAAGCGGCAT GGGTATTGAC
CAGAAAATAG TGAAAGACAC TTCTACCAAC AAAGGCAAAG CGAAGCAGAC ACTGAACTTT
AAAGCCTGGC TGGTCGGCGC AGCTGATGCG CCAGATCTGG GTAATTTCGA AGCAAATACC
ACCTTCCAGA TTACTTACCT GTAA
 
Protein sequence
MSKFVKTAIA AAMVMGAFTS TATIAAGNNG TARFYGTIED SVCSIVPDDH KLEVDMGDIG 
AEKLKNNGTT TPKSFQIRLQ DCVFDTQETM TTTFTGTVSS ANSGNYYTIF NTDTGAAFNN
VSLAIGDSLG TSYKSGMGID QKIVKDTSTN KGKAKQTLNF KAWLVGAADA PDLGNFEANT
TFQITYL