Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2346 |
Symbol | gmd |
ID | 5586851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2310204 |
End bp | 2311325 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640926011 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001463406 |
Protein GI | 157155501 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG TCGCTCTCAT CACCGGTGTA ACCGGACAAG ACGGTTCTTA CCTGGCAGAG TTTCTGCTGG AAAAAGGTTA CGAGGTGCAT GGTATTAAGC GTCGCGCATC GTCATTCAAC ACCGAGCGCG TGGATCACAT TTATCAGGAT CCGCACACCT GCAACCCGAA ATTCCATCTG CATTATGGCG ACCTGAGTGA TACCTCCAAC CTGACGCGCA TTTTGCGTGA AGTACAGCCG GATGAAGTGT ACAACCTGGG GGCAATGAGC CACGTTGCGG TTTCTTTTGA GTCACCGGAA TATACCGCTG ACGTCGACGC GATGGGTACG CTGCGCCTGC TCGAGGCGAT CCGCTTCCTC GGTCTGGAAA AGAAAACCCG TTTCTATCAG GCTTCCACCT CTGAACTGTA TGGTCTGGTG CAGGAAATTC CGCAGAAAGA AACCACGCCG TTCTACCCGC GATCTCCGTA TGCGGTCGCC AAACTGTACG CCTACTGGAT CACCGTTAAC TACCGCGAAT CCTACGGCAT GTACGCCTGC AACGGTATTC TCTTCAACCA TGAATCCCCG CGCCGTGGCG AAACCTTCGT TACCCGCAAA ATAACCCGCG CAATCGCCAA CATCGCCCAG GGGCTGGAGT CGTGCCTGTA CCTCGGCAAT ATGGATTCCC TGCGTGACTG GGGCCATGCC AAAGACTACG TAAAAATGCA GTGGATGATG CTGCAACAGG AACAGCCAGA AGATTTCGTT ATTGCTACCG GCGTTCAGTA CTCCGTGCGT CAGTTCGTAG AAATGGCGGC AGCACAGCTG GGCATCAAAC TGCGCTTTGA AGGCACGGGC GTTGAAGAGA AGGGCATTGT GGTTTCCGTC ACCGGGCATG ACGCGCCGGG CGTTAAACCG GGGGATGTGA TTATCGCCGT TGACCCGCGT TACTTCCGTC CGGCTGAAGT TGAAACGCTG CTCGGTGACC CGACCAAAGC GCACGAAAAA CTGGGCTGGA AACCGGAAAT CACCCTCAGA GAGATGGTGT CTGAAATGGT GGCTAATGAC CTCGAAGCGG CGAAAAAACA CTCTCTGCTG AAATCTCACG GCTACGACGT GGCGATCGCG CTGGAGTCAT AA
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Protein sequence | MSKVALITGV TGQDGSYLAE FLLEKGYEVH GIKRRASSFN TERVDHIYQD PHTCNPKFHL HYGDLSDTSN LTRILREVQP DEVYNLGAMS HVAVSFESPE YTADVDAMGT LRLLEAIRFL GLEKKTRFYQ ASTSELYGLV QEIPQKETTP FYPRSPYAVA KLYAYWITVN YRESYGMYAC NGILFNHESP RRGETFVTRK ITRAIANIAQ GLESCLYLGN MDSLRDWGHA KDYVKMQWMM LQQEQPEDFV IATGVQYSVR QFVEMAAAQL GIKLRFEGTG VEEKGIVVSV TGHDAPGVKP GDVIIAVDPR YFRPAEVETL LGDPTKAHEK LGWKPEITLR EMVSEMVAND LEAAKKHSLL KSHGYDVAIA LES
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