| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2294 |
|---|
| Symbol | pduS |
|---|
| ID | 5586332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2258915 |
|---|
| End bp | 2260258 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640925959 |
|---|
| Product | propanediol utilization protein PduS |
|---|
| Protein accession | YP_001463354 |
|---|
| Protein GI | 157159374 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA AGTTAACCTC CTGCGACGAC CAGACCATCC GCGAGCGAGT ACAAGCAGCA
GGTGTCGTGG GTGCTGGCGG CGCAGGTTTT CCAACCCATA TTAAGCTACA AGCGCGTGTT
GACACTTTCC TGGTGAATGC GGCGGAATGC GAACCCATGT TGAAAGTGGA TCAACAGTTA
ATGGCGCAGC AAGCCAGCCG CCTGCTTCGC GGTGTTCACT ATGCGATGAA AGCCACCGGG
GCCAGCAGCG GAATCATCGC GCTGAAAGAG AAATATCAAC GGGCAATAAA CGCACTCACA
CCACTGTTAC CACCGGATAT CCGCCTGCAT ATTTTGCCCG ATGTTTACCC GGCAGGAGAC
GAAGTGCTGA CCATCTGGAT GGCAACTGGT CGCCGCGTTC CACCCGCTGC ATTACCCGTT
AGCGTCGGTG TGGTGGTCAA TAATGTTCAA ACCGTACTTA ATATTACCAG AGCCGTCGAG
CAACAGTATC CAGTGACGCG CCGCACACTC ACCGTTAATG GTGCAGTGGC GAAACCAATA
ACGGTAACCG TCCCCATCGG CATGTCTTTA CGTGAAGTCC TGGCGCTGGC GGGCGGCGCA
ACAGTGGATG CTCCTGGTTT TATCAATGGC GGGCCGATGA TGGGAAGTTT GATCACATCG
CTCGACACAC CAGTCAGCAA AACCACTGGC GGCTTGCTGG TTTTACCCAA CTCTCATTCA
CTGATCCAAC GTCGAATGCA GAATGACCGC AGCGTACTTG CCGTCGCGAA AACTGTTTGT
GAGCAATGCC GCTTGTGTAC CGATCTCTGT CCACGTCATT TAATCGGCCA CGAACTGGCT
CCCCATTTAC TAGTACGTGC GGTTAACTAC CAACAGCTCG CTACGCCGCA ACTGTTACTG
ACGGCGCTCA CCTGTTCAGA GTGCAACGTC TGCGCCAGCG TCGCCTGTCC GGTAGGAATT
TCACCAATGC GCATAAACCG CCTGCTTAAG CAGGAATTAC GCGCACAAAA TCTCCGTTAC
GAAGGTACCT TAAATCCTGC AGATCCCATG GCAAATTATC GACTGATTCC CGTAAAACGG
CTGGTAACCA GACTTGGCTT AACCCCGTGG TATCAGGATG CGCCATTGTC TGAACAGGTG
CCTCAGCCCG AAAAAGTGAC GTTATTGTTA CGCCAGCACA TCGGTGCCAG CGCAATTGCG
TGTGTACAAA AAGGCGATCG CGTCGTTCAT GGGCAATGTG TAGGTCAAAT TCCACACGGC
ACATTAGGTG CCCCCATTCA TGCCAGTATT GATGGCATGG TCAGCGATGT GACAGAAAAC
GCGATTACGC TTGTGAGAGG TTAA
|
|---|
| Protein sequence | MNVKLTSCDD QTIRERVQAA GVVGAGGAGF PTHIKLQARV DTFLVNAAEC EPMLKVDQQL
MAQQASRLLR GVHYAMKATG ASSGIIALKE KYQRAINALT PLLPPDIRLH ILPDVYPAGD
EVLTIWMATG RRVPPAALPV SVGVVVNNVQ TVLNITRAVE QQYPVTRRTL TVNGAVAKPI
TVTVPIGMSL REVLALAGGA TVDAPGFING GPMMGSLITS LDTPVSKTTG GLLVLPNSHS
LIQRRMQNDR SVLAVAKTVC EQCRLCTDLC PRHLIGHELA PHLLVRAVNY QQLATPQLLL
TALTCSECNV CASVACPVGI SPMRINRLLK QELRAQNLRY EGTLNPADPM ANYRLIPVKR
LVTRLGLTPW YQDAPLSEQV PQPEKVTLLL RQHIGASAIA CVQKGDRVVH GQCVGQIPHG
TLGAPIHASI DGMVSDVTEN AITLVRG
|
|---|
| |