Gene EcE24377A_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_1979 
Symbol 
ID5590418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand+ 
Start bp1964369 
End bp1965022 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID640925651 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001463054 
Protein GI157158900 
COG category[R] General function prediction only 
COG ID[COG4136] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.289049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTGCG TGAAAAATGT TTCGCTACGT TTACCAGAAA GCCGCTTGCT GACAAACGTT 
AACTTTACGG TTGATAAAGG TGACATTGTC ACGTTAATGG GGCCGTCTGG CTGTGGAAAA 
TCCACTCTGT TTTCATGGAT GATTGGTGCA CTGGCTGGAC AGTTTTCTTG TACAGGTGAG 
CTATGGTTCA ATGAGCAACG GATTGACATG CTACCCACCG CACAGCGTCA GATTGGCATT 
CTTTTCCAGG ATGCACTGTT ATTTGACCAG TTCAGCGTCG GGCAAAATTT ACTGCTGGCG 
CTACCGTCGA CGCTCAAGGG GACTGCCAGG CGCAATGCCG TGAAAGACGC GCTTGATCGA 
GCGGGACTGG CTGAAACTTA TCACCAGGAC CCTGCGACAT TATCAGGCGG TCAGCGAGCG 
CGGGTGGCCC TGCTGCGCGC CCTTCTCGCT CAGCCAAAAG CGTTACTCCT GGATGAGCCA 
TTCAGCCGTC TTGATGTGGC TCTGCGCGAT AATTTTCGCC AGTGGGTGTT CAGCGAAGTT 
CGCGAACTGG CGATCCCCGT CGTTCAGGTA ACGCACGATC TCCAGGATGT TCCTGCTGAT 
AGTTCTGTTC TGGATATGGC GCAGTGGTCA GAAAATTACA ACAAACTGCG ATAA
 
Protein sequence
MLCVKNVSLR LPESRLLTNV NFTVDKGDIV TLMGPSGCGK STLFSWMIGA LAGQFSCTGE 
LWFNEQRIDM LPTAQRQIGI LFQDALLFDQ FSVGQNLLLA LPSTLKGTAR RNAVKDALDR 
AGLAETYHQD PATLSGGQRA RVALLRALLA QPKALLLDEP FSRLDVALRD NFRQWVFSEV 
RELAIPVVQV THDLQDVPAD SSVLDMAQWS ENYNKLR