Gene EcE24377A_1876 details

Gene Information

• Locus tag: EcE24377A_1876
• Symbol: ribE
• ID: 5590853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 1868419
• End bp: 1869060
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640925552
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_001462957
• Protein GI: 157154765
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000000224926
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACGG GGATTGTACA GGGCACCGCA AAACTGGTGT CGATTGACGA GAAACCAAAT 
TTTCGTACGC ATGTGGTGGA GTTACCCGAC CACATGCTGG ACGGCCTGGA AACAGGTGCT 
TCCGTGGCGC ATAACGGTTG CTGCCTGACC GTGACGGAAA TTAACGGCAA CCATGTCAGT 
TTTGACCTGA TGAAAGAAAC GTTACGCATT ACCAATCTTG GCGATTTAAA AGTGGGGGAT 
TGGGTAAACG TTGAGCGTGC GGCGAAATTC AGTGATGAAA TTGGCGGACA CTTAATGTCA 
GGTCATATTA TGACCACCGC TGAAGTGGCG AAAATATTAA CCTCGGAAAA TAATCGCCAG 
ATCTGGTTTA AAGTCCAGGA TAGTCAGTTG ATGAAATATA TCCTGTACAA AGGATTTATT 
GGCATCGACG GTATTAGCCT GACCGTCGGC GAAGTCACGC CAACGCGTTT TTGCGTCCAT 
TTAATTCCGG AAACTCTGGA ACGCACGACT CTTGGGAAGA AAAAACTCGG CGCACGCGTC 
AACATTGAAA TTGATCCACA AACTCAGGCA GTGGTAGATA CGGTAGAACG TGTGCTGGCG 
GCACGAGAAA ATGCCATGAA TCAACCAGGT ACAGAAGCCT GA 

 

Protein sequence

MFTGIVQGTA KLVSIDEKPN FRTHVVELPD HMLDGLETGA SVAHNGCCLT VTEINGNHVS 
FDLMKETLRI TNLGDLKVGD WVNVERAAKF SDEIGGHLMS GHIMTTAEVA KILTSENNRQ 
IWFKVQDSQL MKYILYKGFI GIDGISLTVG EVTPTRFCVH LIPETLERTT LGKKKLGARV 
NIEIDPQTQA VVDTVERVLA ARENAMNQPG TEA