| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1812 |
|---|
| Symbol | ydgH |
|---|
| ID | 5586907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 1804435 |
|---|
| End bp | 1805379 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640925488 |
|---|
| Product | YdgH protein |
|---|
| Protein accession | YP_001462893 |
|---|
| Protein GI | 157159019 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00909814 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTA AGAACACCCT CCTGGCGTCG GCACTGCTTT CTGCTACGGC ATTCTCCGTT
AACGCAGCAA CAGAACTGAC ACCGGAGCAA GCGGCAGCGG TTAAACCTTT TGACCGTGTA
GTGGTTACCG GTCGTTTTAA TGCTATTGGC GAAGCGGTGA AAGCCGTTTC TCGTCGCGCA
GATAAAGAAG GTGCCGCCTC TTTTTATGTT GTCGACACTT CTGATTTTGG TAACAGCGGT
AACTGGCGTG TGGTCGCTGA CCTCTATAAA GCCGATGCTG AAAAAGCAGA AGAAACAAGT
AATCGCGTAA TTAACGGTGT TGTCGAACTG CCGAAAGATC AGGCTGTTCT GATTGAACCG
TTTGACACGG TCACCGTCCA GGGCTTCTAT CGTAGCCAGC CAGAAGTCAA TGATGCCATC
ACCAAAGCAG CAAAAGCGAA AGGTGCCTAC TCTTTCTACA TTGTTCGTCA AATCGATGCC
AACCAGGGCG GCAACCAGCG TATTACTGCA TTCATCTATA AAAAAGATGC TAAGAAACGT
ATCGTCCAGA GCCCGGATGT GATCCCGGCA GATTCCGAAG CAGGACGTGC AGCTCTGGCT
GCCGGTGGCG AAGCCGCGAA GAAAGTTGAG ATCCCAGGTG TTGCGACTAC CGCATCACCA
AGTTCTGAAG TCGGTCGTTT CTTTGAAACC CAGTCATCAA AAGGCGGACG TTACACTGTC
ACGCTTCCTG ACGGCACTAA AGTCGAAGAA CTGAACAAAG CGACAGCAGC GATGATGGTC
CCGTTCGACA GCATCAAATT CTCTGGCAAC TACGGCAACA TGACCGAAGT CTCCTATCAG
GTTGCGAAAC GTGCCGCGAA GAAAGGTGCT AAGTATTACC ACATCACCCG CCAGTGGCAG
GAACGTGGTA ATAACCTGAC CGTCAGCGCA GATCTGTATA AATAA
|
|---|
| Protein sequence | MKLKNTLLAS ALLSATAFSV NAATELTPEQ AAAVKPFDRV VVTGRFNAIG EAVKAVSRRA
DKEGAASFYV VDTSDFGNSG NWRVVADLYK ADAEKAEETS NRVINGVVEL PKDQAVLIEP
FDTVTVQGFY RSQPEVNDAI TKAAKAKGAY SFYIVRQIDA NQGGNQRITA FIYKKDAKKR
IVQSPDVIPA DSEAGRAALA AGGEAAKKVE IPGVATTASP SSEVGRFFET QSSKGGRYTV
TLPDGTKVEE LNKATAAMMV PFDSIKFSGN YGNMTEVSYQ VAKRAAKKGA KYYHITRQWQ
ERGNNLTVSA DLYK
|
|---|
| |