| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1787 |
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| Symbol | rspB |
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| ID | 5588272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1778903 |
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| End bp | 1779922 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640925463 |
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| Product | putative dehydrogenase |
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| Protein accession | YP_001462868 |
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| Protein GI | 157158834 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.496797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA TTTTAATTGA AAAACCGAAT CAACTGTCGA TTATCGAACG TGAAATACCC
ACCCCGTCAG CGGGTGAAGT ACGAGTAAAA GTGAAACTTG CCGGAATTTG TGGTTCAGAT
AGCCATATTT ACCGTGGGCA TAATCCTTTT GCGAAATATC CGCGCGTCAT TGGTCATGAA
TTCTTTGGCG TCATTGATGC GGTGGGTGAA GGTGTGGAAA GCGCCAGAGT CGGTGAACGC
GTTGCTGTCG ATCCGGTGGT CAGCTGTGGG CATTGCTATC CGTGCTCTAT AGGTAAGCCG
AACGTTTGTA CGACACTTGC TGTATTAGGT GTGCACGCTG ACGGTGGTTT CAGTGAATAT
GCCGTGGTTC CGGCAAAAAA TGCGTGGAAA ATTCCTGAAG CAGTGGCCGA TCAATATGCG
GTGATGATCG AACCTTTTAC CATTGCGGCT AACGTTACCG GTCATGGTCA ACCGACTGAA
AATGATACCG TTCTGGTTTA TGGTGCCGGT CCAATCGGCC TGACGATCGT TCAGGTATTA
AAAGGCGTCT ATAACGTTAA AAATGTGATT GTTGCCGATC GCATTGATGA ACGACTGGAA
AAAGCGAAAG AGAGCGGGGC AGACTGGGCG ATTAATAACA GCCAGACACC GCTTGGCGAG
ATTTTCGCTG AAAAAGGCAT CAAGCCGACA TTAATTATCG ATGCGGCTTG TCATCCTTCT
ATCCTGAAAG AGGCCGTAAC GCTGGCTTCT CCAGCGGCAC GTATTGTATT GATGGGCTTC
TCCAGTGAAC CGTCTGAAGT GATTCAGCAA GGAATTACCG GAAAAGAACT CTCTATTTTC
TCTTCACGCT TAAATGCAAA TAAATTTCCG GTTGTTATCG ACTGGTTAAG TAAAGGGTTA
ATTAAACCAG AAAAATTAAT TACCCATACG TTTGATTTCC AGCATGTTGC TGATGCCATT
AGTTTATTTG AACAGGATCA AAAACATTGC TGCAAAGTCT TGCTCACTTT TTCTGAATAA
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| Protein sequence | MKSILIEKPN QLSIIEREIP TPSAGEVRVK VKLAGICGSD SHIYRGHNPF AKYPRVIGHE
FFGVIDAVGE GVESARVGER VAVDPVVSCG HCYPCSIGKP NVCTTLAVLG VHADGGFSEY
AVVPAKNAWK IPEAVADQYA VMIEPFTIAA NVTGHGQPTE NDTVLVYGAG PIGLTIVQVL
KGVYNVKNVI VADRIDERLE KAKESGADWA INNSQTPLGE IFAEKGIKPT LIIDAACHPS
ILKEAVTLAS PAARIVLMGF SSEPSEVIQQ GITGKELSIF SSRLNANKFP VVIDWLSKGL
IKPEKLITHT FDFQHVADAI SLFEQDQKHC CKVLLTFSE
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