| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1639 |
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| Symbol | |
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| ID | 5587433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 1630123 |
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| End bp | 1634340 |
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| Gene Length | 4218 bp |
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| Protein Length | 1405 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640925326 |
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| Product | protein rhsD, truncation |
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| Protein accession | YP_001462731 |
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| Protein GI | 157156399 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAA AACCAGCGGC GCGTCAGGGA GATATGACTC AGTATGGCGG TCCCATTGTC
CAGGGTTCGG CAGGTGTAAG AATTGGCGCG CCCACCGGCG TGGCGTGCTC GGTGTGTCCG
GGCGGGATGA CTTCGGGCAA CCCGGTAAAT CCGCTGCTGG GGGCGAAGGT GCTGCCCGGC
GAGACGGACC TTGCGCTGCC CGGCCCGCTG CCGTTCATTC TCTCCCGCAC CTACAGCAGC
TACCGGACGA AGACGCCTGC ACCGGTGGGC GTTTTCGGCC CCGGCTGGAA AGCGCCTTCT
GATATCCGCT TACAGATACG CGATGATGCA CTGGTACTCA ACGACAACGG CGGGCGGAGC
ATTCACTTTG AGCCGCTGCT GCCGGGGGAG GCGGTGTACA GCCGCAGTGA GTCAATGTGG
CTGGTGCGTG GCGGTAAGGC AGTGCAGCCG GACGGCCACA CGCTGGCACG GCTGTGGGCG
TCGCTGCCGC CGGATATCCG GTTAAGCCCG CATCTTTACC TGGCGACCAA CAGCGCACAG
GGGCCGTGGT GGATACTGGG GTGGTCTGAG GGGGTGCCGG GTGCTGAGGA CGTACTGCCA
GCGCCGCTGC CGCCGTACCG GGTGCTTACC GGGATGGCGG ACCGCTTCGG ACGGACGCTG
GCGTACCGGT GTGAGGCCGC CGGTGACCTG GCCGGGGAAA TCACCGGCGT GACGGACGGT
GCCGGGCGGG AGTTCCGTCT GGTACTGACC ACACAGGCAC AGCGGGCGGA AGAGGCCCGT
AAACCGCACA CCGCTTCGTT ATCTTCCCCT GACAGTCCCC GCCCTCTCTC AGCTCCTTCC
TTCCCCGACA CACTGCCCGG TACGGAATAC GGCGCTGACA GCGGTATCCG TCTTTCGGCG
GTGTGGCTGA TGCACGACCC GGAATACCCG GAAAATTTAC CTGCCGCGCC ACTGGTGTGC
TACGACTGGA CGCCACGCGG TGAGCTGGCG GCGGTGTATG ACCGCAGCGG TACGCAGATG
CGCCACTTTA CTTACGATGA TAAATACCGG GGCCGGATGG TGGGGCACCG TTATGCAGGC
AGGCCGGAGA TGCGCTACCG CTACGACGAT GCGGGGCGGG TGGTGGAGCA ACTTAACCCG
GCAGGCCTGA GTTACCGCTA CCAGTATGAG CAGGACCGCA TCACCGTCAC CGACAGCCTG
AACCGGCGTG AGGTGCTGCA TACAGAAGGC GGGGCCGGGC TGAAGCGGGT GGTGAAAAAA
GAACTGGCGG ACGGCAGCGT CACGCACAGC GGGTATGACG CGGCAGGAAG GCTAACGGCG
CAGACGGACG CGGCGGGACG GCGGACAGAG TACGGTCTGA ATGTGGTGTC CGGCGATATC
ACGGACATCA CCACACCGGA CGGGCGGGAG ACGAAATTTT ACTATAACGA CGGGAACCAG
CTGACGGCGG TGGTGTCCCC GGACGGGCTG GAGAGCCGCC GGGCATATGA TGAACCGGGC
AGGCTGGTAT CGGAGACATC GCGCAGTGGG GACGTCATCC GGTATGCTTA TGATAATCCG
CACAGTGAAT TACCGGCCAC GACAACAGAT GCGACGGGCA GCACCCGGCA GATGACGTGG
AGCCGCTACG GGCAGTTGCT GGCGTTCACT GACTGCTCGG GCTACCAGAC CCGCTATGAA
TACGACCGCT TCGGCCAGAT GACGGCGGTT CACCGCGAGG AAGGTATCAG CCTTTACCGC
CACTATGACA ACCGTGGCCG GTTAACCTCG GTGAAAGACG CACAGGGCCG TGAAACGCAG
TATGAGTACA ACGCCGCAGG CGACCTGACT GCCGTTATCA CCCCGGACGG CAACCGGAGC
GAGACACAGT ACGATGCGTG GGGAAAGGCG GTCAGCACCA CGCAGGGCGG GCTGACGCGC
AGCATGGAAT ACGATGCTGC CGGACGTGTC ATCAGTCTGA CTAACGAGAA CGGCAGCCAC
AGCGACTTCA GCTACGATGC GCTGGACCGG TTGGTACAGC AGGGCGGCTT TGACGGGCGG
ACGCAACGTT ATCATTATGA CCTGACCGGA AAACTCACGC AGAGTGAAGA TGAGGGGCTT
GTCACCCTCT GGTACTACGA TGAATCGGAC CGTATCACTC ACCGCACGGT GAACGGCGAA
CCGGCAGAGC AGTGGCAGTA TGATGACCAC GGCTGGCTGA CAGACATCAG CCACCTGAGC
GAAGGCCACC GTGTCGCTGT CCACTACGGC TACGACGATA AGGGCCGCCT GACCGGCGAA
CGGCAGACGG TGGAGAACCC GGAGACGGGG GAACTGCTGT GGCAGCATGA GACGAAACAC
GCCTACAACG AACAGGGGCT GGCAAACCGC GTCACGCCGG ACAGCCTGCC GCCGGTGGAG
TGGCTGACCT ACGGCAGCGG TTACCTGGCG GGCATGAAGC TGGGCGGGAC GCCGCTGGTC
GAGTATACGC GGGACAGGCT GCACCGTGAG ACGGTGCGCA GCTTCGGCAG CATGGCAGGC
AGTAATGCCG CATATGAACT GACCAGCACA TACACCCCCG CAGGCCAGTT ACAGAGCCAG
CACCTGAACA GCCTGGTGTA TGACCGTGAC TACGGGTGGA ATGACAACGG CGACCTGGTG
CGCATCAGCG GTCCGCGACA GACGCGGGAA TACGGCTACA GCGCCACGGG CAGGCTGGAG
AGCGTGCGCA CCCTCGCACC GGACCTGGAC ATCCGCATCC CGTATGCCAC CGACCCGGCG
GGAAACCGCC TGCCGGACCC GGAGCTGCAC CCGGACAGTA CCCTCACGGC GTGGCCGGAT
AACCGCATCG CAGAGGATGC GCACTATGTT TACCACTATG ATGAATACGG CAGACTGACG
GAGAAGACGG ACCTTATCCC GGCGGGTGTT ATCCGGACGG ACGACGAGCG GACCCACCAC
TACCACTACG ACAGCCAGCA CCGTCTGGTG TTCCACACGC GGATACAGCA TGGCGAGCCA
CTGGTCGAGA GCCGCTACCT CTACGACCCG CTGGGACGGC GAATGGCGAA ACGGGTATGG
CGGCGGGAGC GTGACCTGAC GGGGTGGATG TCGCTGTCGC GTAAACCGGA GATGACGTGG
TACGGGTGGG ACGGCGACCG GCTGACGACG GTACAGACCG ACACCACGCG TATCCAGACG
GTATATCAGC CGGGGAGCTT CGCGCCGCTC ATCCGCATCG AAACAGACAA CGGCGAGCGG
GAGAAAGCGC AGCGCCGCAG CCTGGCGGAG AAGCTGCAGC AGGAAGGGAG CGAGGACGGG
CACGGCGTGG TATTTCCGGC TGAACTGGTG CGGCTGCTGG ACAGGCTGGA GGAAGAAATC
CGGGCAGACC GCGTGAGCAG TGAAAGCCGG GCGTGGCTTG CGCAGTGCGG GCTGACGGTG
GAGCAACTGG CCAGACAGGT GGAGCCGGAA TACACACCGG CGCGAAAAGT TCATTTTTAC
CACTGCGACC ACCGGGGCCT GCCGCTGGCG CTCATCAGCG AAGACGGCAA TACGGCGTGG
CGCGGGGAGT ATGATGAATG GGGCAACCAG CTTAATGAAG AGAACCCGTA TTACCTGCAC
CAGCCATACC GTCTGCCGGG GCAGCAGCAT GATGAGGAAT CAGGGCTGTA CTATAACCGG
AACCGGTACT ATGACCCGCT ACAGGGGAGG TATATTACAC AAGACCCCAT TGGGCTGGCG
GGGGGATGGA ACCTGTATAA TTACCCACTG AATCCGATAA TAAGGATGGA TCCTTTGGGT
TTGTATAATT TATATCAATT ATTATATGAT GTTTGGCATG ATGATTCATA TGGAACATCA
TCAATTGATA TTACTGGCAG TGGAGATCTA ATATCATTAG GTGGTCATGC AGGACTTGGC
GTTGCGTTTG CTAAAAAGAA AGGTGAAATG TTATCTGATA TTTGTATTTA TGCTACAGCA
TGCGGACATG CAGGAATTGG TGGTGGGATA AATGCGGCTA TCACATATTC TGAGACCAAG
TCTTTACCTA CATCGGGAGT CAGCAATTCA GTAGGTGTAA CGGTTGGCGG CGGAGTTGGG
GGGCATTTTG CGTATACTTA TGTAGTGGAT GTTGATAATC CAGAATCATC GACAGAATCT
GTTGGTATCG GTGCAGGTGT TGACGCTTCA GTTATGACTC TGGCTTGTAG AACGTGGCAA
GAATGCTGGG TCAATTAA
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| Protein sequence | MSGKPAARQG DMTQYGGPIV QGSAGVRIGA PTGVACSVCP GGMTSGNPVN PLLGAKVLPG
ETDLALPGPL PFILSRTYSS YRTKTPAPVG VFGPGWKAPS DIRLQIRDDA LVLNDNGGRS
IHFEPLLPGE AVYSRSESMW LVRGGKAVQP DGHTLARLWA SLPPDIRLSP HLYLATNSAQ
GPWWILGWSE GVPGAEDVLP APLPPYRVLT GMADRFGRTL AYRCEAAGDL AGEITGVTDG
AGREFRLVLT TQAQRAEEAR KPHTASLSSP DSPRPLSAPS FPDTLPGTEY GADSGIRLSA
VWLMHDPEYP ENLPAAPLVC YDWTPRGELA AVYDRSGTQM RHFTYDDKYR GRMVGHRYAG
RPEMRYRYDD AGRVVEQLNP AGLSYRYQYE QDRITVTDSL NRREVLHTEG GAGLKRVVKK
ELADGSVTHS GYDAAGRLTA QTDAAGRRTE YGLNVVSGDI TDITTPDGRE TKFYYNDGNQ
LTAVVSPDGL ESRRAYDEPG RLVSETSRSG DVIRYAYDNP HSELPATTTD ATGSTRQMTW
SRYGQLLAFT DCSGYQTRYE YDRFGQMTAV HREEGISLYR HYDNRGRLTS VKDAQGRETQ
YEYNAAGDLT AVITPDGNRS ETQYDAWGKA VSTTQGGLTR SMEYDAAGRV ISLTNENGSH
SDFSYDALDR LVQQGGFDGR TQRYHYDLTG KLTQSEDEGL VTLWYYDESD RITHRTVNGE
PAEQWQYDDH GWLTDISHLS EGHRVAVHYG YDDKGRLTGE RQTVENPETG ELLWQHETKH
AYNEQGLANR VTPDSLPPVE WLTYGSGYLA GMKLGGTPLV EYTRDRLHRE TVRSFGSMAG
SNAAYELTST YTPAGQLQSQ HLNSLVYDRD YGWNDNGDLV RISGPRQTRE YGYSATGRLE
SVRTLAPDLD IRIPYATDPA GNRLPDPELH PDSTLTAWPD NRIAEDAHYV YHYDEYGRLT
EKTDLIPAGV IRTDDERTHH YHYDSQHRLV FHTRIQHGEP LVESRYLYDP LGRRMAKRVW
RRERDLTGWM SLSRKPEMTW YGWDGDRLTT VQTDTTRIQT VYQPGSFAPL IRIETDNGER
EKAQRRSLAE KLQQEGSEDG HGVVFPAELV RLLDRLEEEI RADRVSSESR AWLAQCGLTV
EQLARQVEPE YTPARKVHFY HCDHRGLPLA LISEDGNTAW RGEYDEWGNQ LNEENPYYLH
QPYRLPGQQH DEESGLYYNR NRYYDPLQGR YITQDPIGLA GGWNLYNYPL NPIIRMDPLG
LYNLYQLLYD VWHDDSYGTS SIDITGSGDL ISLGGHAGLG VAFAKKKGEM LSDICIYATA
CGHAGIGGGI NAAITYSETK SLPTSGVSNS VGVTVGGGVG GHFAYTYVVD VDNPESSTES
VGIGAGVDAS VMTLACRTWQ ECWVN
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