| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1460 |
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| Symbol | trpB |
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| ID | 5588370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1450987 |
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| End bp | 1452180 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640925153 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001462558 |
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| Protein GI | 157157226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00292681 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAT TACTTAACCC CTATTTTGGT GAGTTTGGCG GCATGTACGT GCCACAAATC
CTGATGCCTG CTCTGCGCCA GCTGGAAGAA GCTTTTGTCA GTGCGCAAAA AGATCCTGAA
TTTCAGGCTC AGTTCAACGA CCTGCTGAAA AACTATGCCG GGCGTCCAAC CGCGCTGACC
AAATGCCAGA ACATTACAGC CGGGACGAAC ACCACTCTGT ATCTCAAGCG TGAAGATTTG
CTGCACGGCG GCGCGCATAA AACTAACCAG GTGCTCGGTC AGGCTTTACT GGCGAAGCGG
ATGGGTAAAA CCGAAATCAT CGCCGAAACC GGTGCCGGTC AGCATGGCGT GGCGTCGGCC
CTTGCCAGCG CCCTGCTCGG CCTGAAATGC CGTATTTATA TGGGTGCCAA AGACGTAGAA
CGCCAGTCGC CTAACGTTTT TCGTATGCGC TTAATGGGTG CGGAAGTGAT CCCGGTGCAT
AGCGGTTCCG CGACGCTGAA AGATGCCTGT AACGAGGCGC TGCGCGACTG GTCCGGTAGT
TACGAAACCG CGCACTATAT GCTGGGCACC GCAGCTGGCC CGCATCCTTA TCCGACCATT
GTGCGTGAGT TTCAGCGGAT GATTGGCGAA GAAACCAAAG CGCAGATTCT GGAAAGAGAA
GGTCGCCTGC CGGATGCCGT TATCGCCTGT GTTGGCGGCG GTTCGAATGC CATCGGCATG
TTTGCTGATT TCATCAATGA AACCAACGTC GGCCTGATTG GTGTGGAGCC AGGTGGTCAC
GGTATCGAAA CTGGCGAGCA CGGCGCACCG TTAAAACATG GTCGCGTGGG CATCTATTTC
GGTATGAAAG CGCCGATGAT GCAAACCGAA GACGGGCAGA TTGAAGAATC TTACTCCATC
TCCGCCGGAC TGGATTTCCC GTCTGTCGGC CCACAACACG CGTATCTTAA CAGCACTGGA
CGCGCTGATT ACGTGTCTAT TACCGATGAT GAAGCCCTTG AAGCCTTCAA AACGCTGTGC
CTGCACGAAG GGATCATCCC GGCGCTGGAA TCCTCCCACG CCCTGGCCCA TGCGTTGAAA
ATGATGCGCG AAAACCCGGA TAAAGAGCAG CTACTGGTGG TTAACCTTTC CGGTCGCGGC
GATAAAGACA TCTTCACCGT TCACGATATT TTGAAAGCAC GAGGGGAAAT CTGA
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| Protein sequence | MTTLLNPYFG EFGGMYVPQI LMPALRQLEE AFVSAQKDPE FQAQFNDLLK NYAGRPTALT
KCQNITAGTN TTLYLKREDL LHGGAHKTNQ VLGQALLAKR MGKTEIIAET GAGQHGVASA
LASALLGLKC RIYMGAKDVE RQSPNVFRMR LMGAEVIPVH SGSATLKDAC NEALRDWSGS
YETAHYMLGT AAGPHPYPTI VREFQRMIGE ETKAQILERE GRLPDAVIAC VGGGSNAIGM
FADFINETNV GLIGVEPGGH GIETGEHGAP LKHGRVGIYF GMKAPMMQTE DGQIEESYSI
SAGLDFPSVG PQHAYLNSTG RADYVSITDD EALEAFKTLC LHEGIIPALE SSHALAHALK
MMRENPDKEQ LLVVNLSGRG DKDIFTVHDI LKARGEI
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