| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1312 |
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| Symbol | |
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| ID | 5588165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 1311992 |
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| End bp | 1312912 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640925009 |
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| Product | autotransporter (AT) family porin |
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| Protein accession | YP_001462418 |
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| Protein GI | 157154735 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000904355 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGA ACGACCGTGC GGGTGAAATG CGCTACATCG ATCCTGTAAC TGAACAGGAG
CGTTCAAGCC GACTTTGGCT ACGTCAAATT GGCGGGCATA ATGCCTGGCG TGACAGCAAC
GGACAGTTGA GAACGACCTC GCATCGCTAC GTCTCGCAGT TAGGGGCCGA TCTGTTAACC
GGTGGTTTTA CCGACAGTGA CAGTTGGCGT TTGGGAGTGA TGGCTGGTTA TGCCCGCGAC
TACAACTCAA CTCATTCCAG CGTGTCGGAT TATCGTTCGA AAGGGAGTGT CAGAGGCTAT
TGCGCAGGGC TGTATGCCAC CTGGTTTGCC GATGACATCA GTAAAAAAGG CGCATACATT
GACGCCTGGG CGCAATATAG CTGGTTTAAA AACTCGGTGA AAGGGGATGA ATTAGCCTAT
GAATCCTATA GTGCGAAAGG CGCAACCGTC TCGCTGGAAG CGGGTTACGG CTTTGCCCTG
AATAAATCCT TTGGTCTGGA AGCGGCGAAA TACACGTGGA TATTCCAGCC ACAGGCACAG
GCTATCTGGA TGGGCGTCGA TCATAATGCG CACACCGAAG CCAATGGCTC ACGTATTGAG
AATGACGCAA ATAACAACAT CCAGACCCGA CTTGGTTTCC GCACCTTTAT TCGTACTCAG
GAGAAAAACA GCGGTCCGCA CGGTGACGAC TTTGAACCTT TTGTTGAAAT GAACTGGTTC
CATAACAGTA AAGATTTTGC TGTCTCAATG AACGGTGTGA AAGTCGAACA AGATGGGGCG
AGTAATTTGG GGGAAATTAA ACTTGGCGTA AATGGCAACC TGAATCCAGC GGCCAGCGTC
TGGGGGAATG TGGGCGTGCA GCTGGGTGAT AATGGCTACA ATGACACCGC AGTGATGGTG
GGCCTGAAAT ATAAGTTCTG A
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| Protein sequence | MRLNDRAGEM RYIDPVTEQE RSSRLWLRQI GGHNAWRDSN GQLRTTSHRY VSQLGADLLT
GGFTDSDSWR LGVMAGYARD YNSTHSSVSD YRSKGSVRGY CAGLYATWFA DDISKKGAYI
DAWAQYSWFK NSVKGDELAY ESYSAKGATV SLEAGYGFAL NKSFGLEAAK YTWIFQPQAQ
AIWMGVDHNA HTEANGSRIE NDANNNIQTR LGFRTFIRTQ EKNSGPHGDD FEPFVEMNWF
HNSKDFAVSM NGVKVEQDGA SNLGEIKLGV NGNLNPAASV WGNVGVQLGD NGYNDTAVMV
GLKYKF
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