| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1130 |
|---|
| Symbol | |
|---|
| ID | 5589956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1150513 |
|---|
| End bp | 1151694 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640924833 |
|---|
| Product | putative monooxygenase rutA |
|---|
| Protein accession | YP_001462246 |
|---|
| Protein GI | 157155454 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03612] pyrimidine utilization protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.69729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAACAA GCCATTACGC GGCTGAAAAG GATATGCAGG ACGCAGTGCC CCGTCTGACT
TTCACTTTAC GAGACGAAGA GAGGTTGATG ATGAAAATTG GCGTATTCGT ACCTATTGGC
AACAACGGCT GGCTCATTTC GACCCACGCG CCGCAGTACA TGCCGACCTT TGAACTGAAT
AAAGCCATTG TACAAAAAGC GGAGCACTAC CATTTCGATT TCGCCCTGTC GATGATCAAA
CTGCGTGGCT TTGGCGGCAA AACTGAGTTC TGGGATCACA ACCTTGAGTC GTTCACCTTG
ATGGCGGGGC TGGCAGCCGT CACCTCACGC ATTCAGATTT ACGCGACAGC TGCCACCTTA
ACGTTACCTC CGGCAATCGT CGCCCGTATG GCCGCAACCA TTGACTCCAT CTCTGGCGGG
CGTTTTGGCG TCAACCTCGT GACTGGCTGG CAAAAGCCCG AGTATGAGCA GATGGGTATC
TGGCCTGGCG ATGACTATTT CTCCCGTCGT TACGACTATC TCACCGAATA TGTTCAGGTG
CTGCGCGACC TGTGGGGCTC GGGGAAAAGC GATTTTAAAG GCGATTTTTT CACCATGAAT
GATTGTCGCG TCAGTCCGCA ACCGAGTGTA CCCATGAAAG TGATCTGCGC CGGGCAAAGC
GACGCTGGCA TGGCGTTCTC CGCCCAGTAT GCCGATTTCA ACTTCTGTTT CGGCAAAGGC
GTAAATACAC CCACGGCTTT CGCCCCGACC GCTGCGCGGA TGAAACAGGC CGCAGAGCAA
ACCGGGCGCG ACGTTGGCTC TTATGTATTG TTTATGGTGA TTGCCGATGA AACCGACGAT
GCCGCTCGCG CCAAATGGGA ACACTACAAA GCGGGCGCGG ATGAAGAGGC GTTAAGCTGG
CTAACCGAAC AAAGTCAGAA AGATACCCGC TCCGGTACTG ACACCAACGT CCGTCAGATG
GCCGATCCCA CTTCGGCGGT AAACATCAAT ATGGGGACGT TAGTCGGTTC TTACGCCAGT
GTCGCGCGCA TGTTAGATGA AGTCGCAAGC GTGCCTGGTG CCGAAGGCGT GCTGTTGACC
TTCGATGATT TTCTGTCGGG AATCGAAACC TTCGGCGAGC GCATTCAACC ACTGATGCAG
TGCCGCGCCC ATCTCCCTGC GCTGACTCAG GAGGTGGCAT GA
|
|---|
| Protein sequence | MQTSHYAAEK DMQDAVPRLT FTLRDEERLM MKIGVFVPIG NNGWLISTHA PQYMPTFELN
KAIVQKAEHY HFDFALSMIK LRGFGGKTEF WDHNLESFTL MAGLAAVTSR IQIYATAATL
TLPPAIVARM AATIDSISGG RFGVNLVTGW QKPEYEQMGI WPGDDYFSRR YDYLTEYVQV
LRDLWGSGKS DFKGDFFTMN DCRVSPQPSV PMKVICAGQS DAGMAFSAQY ADFNFCFGKG
VNTPTAFAPT AARMKQAAEQ TGRDVGSYVL FMVIADETDD AARAKWEHYK AGADEEALSW
LTEQSQKDTR SGTDTNVRQM ADPTSAVNIN MGTLVGSYAS VARMLDEVAS VPGAEGVLLT
FDDFLSGIET FGERIQPLMQ CRAHLPALTQ EVA
|
|---|
| |