Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1094 |
Symbol | appB |
ID | 5590706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1117957 |
End bp | 1119093 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640924797 |
Product | cytochrome bd-II oxidase, subunit II |
Protein accession | YP_001462210 |
Protein GI | 157158801 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0483515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATT ATGAAACATT GCGCTTCATC TGGTGGCTGC TGATTGGCGT GATCCTGGTG GTCTTTATGA TCTCCGACGG ATTTGACATG GGGATCGGCT GTCTGCTGCC GCTGGTGGCG CGTAATGATG ATGAACGCCG GATAGTGATA AACAGCGTTG GTGCACACTG GGAAGGCAAC CAGGTCTGGT TGATCCTCGC TGGTGGGGCA TTATTTGCCG CCTGGCCCAG AGTGTATGCA GCGGCGTTTT CCGGCTTTTA TGTGGCGATG ATCCTGGTGC TGTGCTCGCT GTTCTTCCGT CCGCTGGCCT TTGATTATCG CGGAAAAATT GCCGATGCAC GCTGGCGTAA AATGTGGGAT GCCGGTCTGG TCATCGGCAG TCTGGTGCCG CCGGTAGTCT TCGGTATCGC CTTCGGCAAC TTGTTGCTCG GCGTGCCGTT TGCCTTCACA CCGCAATTAC GCGTGGAGTA TCTCGGCAGC TTCTGGCAAC TGCTGACGCC ATTCCCTTTA TTGTGCGGAT TGCTCAGCCT TGGGATGGTG ATTTTGCAAG GTGGCGTCTG GTTACAACTG AAAACTGTTG GTGTGATTCA TCTGCGTTCA CAGCTGGCGA CTAAACGCGC TGCACTGTTG GTGATGCTGT GCTTTTTGCT GGCGGGTTAC TGGCTGTGGG TCGGTATTGA TGGCTTTGTA CTGCTCGCCC AGGATGCTAA CGGTCCTTCC AATCCGTTAA TGAAACTGGT GGCAGTGCTA CCTGGTGCCT GGATGAATAA TTTCGTCGAA TCGCCCGTTT TGTGGATCTT CCCGCTGCTG GGGTTCTTTT GCCCATTGCT GACGGTGATG GCGATTTATC GTGGTCGCCC GGGGTGGGGA TTTTTGATGG CGTCATTGAT GCAATTTGGC GTGATTTTCA CGGCAGGCAT CACGCTGTTC CCCTTCGTCA TGCCGTCAAG CGTGAGTCCG ATCTCCAGCC TGACGTTGTG GGACAGCACT TCCAGCCAGC TGACGCTGAG TATTATGTTG GTAATCGTGC TGATATTTTT GCCCATTGTG TTGCTCTACA CTCTGTGGAG CTACTACAAA ATGTGGGGGC GCATGACAAC AGAAACTCTC CGCCGTAACG AAAACGAGTT GTACTAA
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Protein sequence | MFDYETLRFI WWLLIGVILV VFMISDGFDM GIGCLLPLVA RNDDERRIVI NSVGAHWEGN QVWLILAGGA LFAAWPRVYA AAFSGFYVAM ILVLCSLFFR PLAFDYRGKI ADARWRKMWD AGLVIGSLVP PVVFGIAFGN LLLGVPFAFT PQLRVEYLGS FWQLLTPFPL LCGLLSLGMV ILQGGVWLQL KTVGVIHLRS QLATKRAALL VMLCFLLAGY WLWVGIDGFV LLAQDANGPS NPLMKLVAVL PGAWMNNFVE SPVLWIFPLL GFFCPLLTVM AIYRGRPGWG FLMASLMQFG VIFTAGITLF PFVMPSSVSP ISSLTLWDST SSQLTLSIML VIVLIFLPIV LLYTLWSYYK MWGRMTTETL RRNENELY
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