Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0744 |
Symbol | |
ID | 5588548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 769860 |
End bp | 772361 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640924457 |
Product | fimbrial usher family protein |
Protein accession | YP_001461877 |
Protein GI | 157156026 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGGCGC TATCGCCGCC TTTCATAAAA TATTTATCAG GTATGGACAC CGTGAATATT TATCGACTCT CTTTTGTATC CTGCCTGGTC GTGGCGATGC CTTGCGCATT GGCGGTCGAA TTCAACCTTA ATGTTCTCGA TAAATCAATG CGCGACCGCA TTGATATTTC ATTATTAAAG GAAAAAGGAG TCATTGCTCC CGGTGAGTAT TTTGTTAGCG TTGCGGTAAA TAATAACCAA ATCAGTAACG GGCAAAAGAT TAACTGGCAC AAAAATGACG ATAAAACCAT TCCGTGCATC AATGATTTAC TGGTCGATAA ATTTGGCTTA AAACCTGAAG TCCGTCAGTC GTTACCATTG ATAAATCAGT GCGTCGATTT TAGCTCCCGA CCTGAAATGC TCTTCAATTT CGATCAAGCC AATCAGCAAC TGAATATTAG TATTCCGCAA GCCTGGCTGG CGTGGCACTC AGAAAACTGG ACCCCACCCT CCACATGGAA AGAAGGTGTC GCCGGTATCC TGATGGATTA CAACTTGTTT GCCAGCAGCT ACCGCCCACA GGACGGCAGC AGCAGCACTA ACCTGAACGC CTACGGTACC ACCGGAATTA ACGCCGGGGC ATGGCGCTTA CGTAGTGATT ATCAGTTGAA TCAGACTGAT AGCGATGATA ACCATGAACA GTCAGGCGGA ATATCGCGCA CCTATCTTTT TCGTCCATTA CCGCAATTAG GCTCTAAATT AACCCTCGGC GAAACGGATT TTAGTTCCAA TATTTTCGAC GGTTTTTCTT ATACCGGCGC GGCACTGGCA AGTGACGAGC GAATGTTGCC ATGGGAACTA CGCGGCTACG CCCCACAAAT TAGCGGTATT GCACAGACCA ATGCCACGGT GACGATCAGT CAATCAGGCC GCGTCATTTA CCAGAAAAAA GTCCCACCAG GCCCATTTAT CATTGACGAC CTTAATCAGT CTGTTCAGGG CACACTGGAT GTCAAAGTGA CGGAAGAAGA TGGTCGGGTG AACAATTTCC AGGTTTCGGC AGCATCGACG CCCTTCCTGA CTCGTCAGGG ACAGGTTCGC TATAAACTGG CCGCGGGTCA GCCACGGCCC TCCATGTCAC ATCAAACTGA AAATGAAACC TTTTTTAGCA ATGAAGTTTC CTGGGGGATG CTCTCAAACA CCTCGCTGTA CGGCGGCCTG CTGCTTTCTG GTGATGACTA CCATTCTGCC GCAATGGGTA TCGGGCAAAA TATGCTGTGG CTTGGTGCGC TGTCGTTTGA TGTCACCTGG GCCAGTAGCC ATTTTGATAC TCAGCAGGAC GAGCGGGGCT TAAGCTACCG TTTTAATTAC AGCAAACAAG TGGATGCCAC CAACAGCACG ATTTCGCTCG CCGCTTATCG TTTCTCCGAT CGTCATTTTC ACAGCTACGC CAACTATCTG GATCACAAAT ACAACGACAG CGATGCGCAG GACGAAAAAC AGACGATCAG CTTATCCGTG GGCCAACCGA TTACCCCACT AAACCTCAAT CTTTACGCCA ACCTGCTACA TCAAACCTGG TGGAATGCAG ACGCCTCCAC GACCGCCAAC ATCACGGCAG GTTTTAATGT TGATATTGGT GACTGGAGAG ATATCTCTAT TTCGACGTCA TTCAATACAA CCCATTACGA AGATAAAGAT CGCGACAACC AGATTTACCT GTCGATTTCG CTCCCCTTCG GTAACGGTGG TCGGGTTGGC TATGACATGC AAAACAGTAG CCACAGCACC ACACACCGCA TGTCGTGGAA CGATACGCTG GATGAACGTA ATAGCTGGGG CATGTCTGCC GGACTGCAAT CCGACCGTCC TGACAATGGA GCCCAGGTGA GCGGTAACTA TCAGCACCTG AGTTCAGCGG GTGAGTGGGA TATTTCTGGT ACCTATGCCG CCAATGATTA CAGTTCCGTC AGCAGCAGCT GGAGCGGTTC TTTCACCGCA ACCCAATATG GTGCAGCGTT TCATCGCCGC AGCTCCACCA ATGAACCACG CCTGATGGTC AGCACCGATG GCGTGGCAGA TATTCCGGTT CAGGGCAATC TCGACTACAC CAACCATTTT GGCATTGCGG TGGTGCCGTT GATTTCCAGT TACCAGCCTT CCACCGTGGC GGTGAACATG AATGACTTAC CCGACGGCGT AACAGTTGCA GAAAACGTTA TCAAAGAAAC GTGGATTGAA GGCGCGATAG GTTACAAATC ACTGGCTTCC CGTTCCGGTA AAGACGTTAA CGTCATCATT CGCAACGCCA GCGGTCAGTT TCCTCCCCTC GGAGCGGATA TCCGCCAGGA TGACAGCGGC ATTAGCGTGG GGATGGTTGG CGAGGAAGGA CATGCCTGGT TAAGCGGAGT CGCTGAAAAT CAAAAGTTTA CCGTGGTCTG GGGTGATAGC CAGCATTGCT CGCTCCATCT TCCTGAACAT ATGGAAGACA CCGCAAATCG CCTGATTTTA CCTTGTCATT AA
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Protein sequence | MAALSPPFIK YLSGMDTVNI YRLSFVSCLV VAMPCALAVE FNLNVLDKSM RDRIDISLLK EKGVIAPGEY FVSVAVNNNQ ISNGQKINWH KNDDKTIPCI NDLLVDKFGL KPEVRQSLPL INQCVDFSSR PEMLFNFDQA NQQLNISIPQ AWLAWHSENW TPPSTWKEGV AGILMDYNLF ASSYRPQDGS SSTNLNAYGT TGINAGAWRL RSDYQLNQTD SDDNHEQSGG ISRTYLFRPL PQLGSKLTLG ETDFSSNIFD GFSYTGAALA SDERMLPWEL RGYAPQISGI AQTNATVTIS QSGRVIYQKK VPPGPFIIDD LNQSVQGTLD VKVTEEDGRV NNFQVSAAST PFLTRQGQVR YKLAAGQPRP SMSHQTENET FFSNEVSWGM LSNTSLYGGL LLSGDDYHSA AMGIGQNMLW LGALSFDVTW ASSHFDTQQD ERGLSYRFNY SKQVDATNST ISLAAYRFSD RHFHSYANYL DHKYNDSDAQ DEKQTISLSV GQPITPLNLN LYANLLHQTW WNADASTTAN ITAGFNVDIG DWRDISISTS FNTTHYEDKD RDNQIYLSIS LPFGNGGRVG YDMQNSSHST THRMSWNDTL DERNSWGMSA GLQSDRPDNG AQVSGNYQHL SSAGEWDISG TYAANDYSSV SSSWSGSFTA TQYGAAFHRR SSTNEPRLMV STDGVADIPV QGNLDYTNHF GIAVVPLISS YQPSTVAVNM NDLPDGVTVA ENVIKETWIE GAIGYKSLAS RSGKDVNVII RNASGQFPPL GADIRQDDSG ISVGMVGEEG HAWLSGVAEN QKFTVVWGDS QHCSLHLPEH MEDTANRLIL PCH
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