| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0482 |
|---|
| Symbol | cof |
|---|
| ID | 5590290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 502560 |
|---|
| End bp | 503378 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640924206 |
|---|
| Product | hydrolase Cof |
|---|
| Protein accession | YP_001461633 |
|---|
| Protein GI | 157156257 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTC TGGCAGCATT TGATATGGAT GGCACTTTAT TGATGCCTGA CCATCATTTA
GGTGAGAAAA CCCTCTCTAC TTTGGCGCGA CTGCGTGAAC GCGACATTAC CCTCACTTTT
GCCACGGGGC GTCATGCGCT GGAGATGCAG CATATTCTCG GGGCGCTATC GCTGGATGCA
TATTTGATTA CCGGCAACGG AACGCGCGTG CATTCTCTGG AAGGTGAACT TTTACATCGT
GATGATTTAC CTGCGGATGT CGCGGAGCTG GTGCTGTATC AGCAATGGGA TACCCGAGCC
AGCATGCATA TCTTCAATGA CGACGGTTGG TTTACCGGGA AAGAGATCCC TGCGTTGTTG
CAGGCATTTG TCTATAGCGG TTTTCGTTAT CAGATAATCG ATGTCAAAAA AATGCCACTC
GGCAGCGTCA CCAAGATCTG CTTCTGTGGC GATCACGACG ATCTTACACG CTTGCAGATC
CAGCTATACG AAGCATTAGG CGAGCGTGCA CATTTGTGTT TTTCCGCCAC GGATTGCCTC
GAAGTGCTGC CGGTGGGCTG CAATAAAGGC GCTGCATTGA CGGTGCTGAC CCAACATTTA
GGTTTATCGT TGCGCGATTG CATGGCCTTT GGTGATGCGA TGAACGATCG CGAAATGTTA
GGCAGCGTCG GTAGCGGGTT TATTATGGGC AATGCGATGC CGCAACTGCG CGCGGAGCTC
CCGCATTTAC CGGTGATTGG ACATTGCCGA AATCAGGCTG TCTCTCACTA TTTGACGCAC
TGGCTGGACT ATCCACATCT ACCTTATTCC CCCGAATAA
|
|---|
| Protein sequence | MARLAAFDMD GTLLMPDHHL GEKTLSTLAR LRERDITLTF ATGRHALEMQ HILGALSLDA
YLITGNGTRV HSLEGELLHR DDLPADVAEL VLYQQWDTRA SMHIFNDDGW FTGKEIPALL
QAFVYSGFRY QIIDVKKMPL GSVTKICFCG DHDDLTRLQI QLYEALGERA HLCFSATDCL
EVLPVGCNKG AALTVLTQHL GLSLRDCMAF GDAMNDREML GSVGSGFIMG NAMPQLRAEL
PHLPVIGHCR NQAVSHYLTH WLDYPHLPYS PE
|
|---|
| |