Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0122 |
Symbol | speD |
ID | 5589812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 136361 |
End bp | 137155 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640923851 |
Product | S-adenosylmethionine decarboxylase |
Protein accession | YP_001461288 |
Protein GI | 157158809 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1586] S-adenosylmethionine decarboxylase |
TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0933555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAC TGAAACTGCA TGGCTTTAAT AATCTGACCA AAAGTCTGAG TTTTTGTATT TACGATATCT GCTACGCCAA AACTGCCGAA GAGCGCGACG GTTATATTGC TTATATCGAT GAACTCTATA ATGCCAACCG TCTGACCGAA ATCCTGTCAG AAACCTGTTC CATTATCGGG GCCAATATTC TTAACATCGC CCGCCAGGAT TACGAACCAC AGGGTGCCAG CGTCACTATT CTGGTGAGTG AAGAACCGGT TGACCCGAAA CTCATCGACA AAACAGAACA CCCCGGCCCA CTGCCAGAAA CGGTCGTTGC CCATCTCGAT AAAAGTCATA TTTGCGTACA TACCTACCCG GAAAGTCATC CTGAAGGCGG TTTATGTACC TTCCGCGCCG ATATTGAAGT CTCTACCTGC GGCGTGATTT CTCCGCTGAA GGCGCTGAAT TACCTGATCC ACCAGCTTGA GTCCGATATC GTAACCATTG ATTATCGCGT GCGCGGTTTT ACCCGCGACA TTAACGGTAT GAAGCACTTT ATCGACCATG AGATTAATTC GATTCAGAAC TTTATGTCTG ACGATATGAA GGCGCTGTAT GACATGGTGG ATGTGAACGT CTATCAGGAA AATATCTTCC ATACCAAGAT GTTGCTTAAA GAGTTCGACC TTAAGCACTA CATGTTCCAC ACCAAACCGG AAGATTTAAC CGACAGCGAG CGCCAGGAAA TTACCGCTGC GCTGTGGAAA GAAATGCGCG AGATTTATTA CGGGCGCAAT ATGCCAGCTG TTTAA
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Protein sequence | MKKLKLHGFN NLTKSLSFCI YDICYAKTAE ERDGYIAYID ELYNANRLTE ILSETCSIIG ANILNIARQD YEPQGASVTI LVSEEPVDPK LIDKTEHPGP LPETVVAHLD KSHICVHTYP ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTIDYRVRGF TRDINGMKHF IDHEINSIQN FMSDDMKALY DMVDVNVYQE NIFHTKMLLK EFDLKHYMFH TKPEDLTDSE RQEITAALWK EMREIYYGRN MPAV
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