Gene EcE24377A_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0087 
SymbolmurE 
ID5588782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp94856 
End bp96343 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content57% 
IMG OID640923818 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_001461255 
Protein GI157159417 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.162607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGCCAGACGC ACCTTCGCGA 
GCACTGCGAG AGATGACACT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTAGCT
GTAGTAGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGTGTG
GCTGCCATTA TTGCAGAGGC GAAAGATGAG GCGACCGATG GTGAAATCCG TGAAATGCAC
GGCGTACCGG TCATCTATCT CAGCCAGCTC AACGAGCGTT TATCTGCACT GGCGGGCCGC
TTTTACCATG AACCCTCTGA CAATTTACGT CTCGTAGGCG TAACGGGCAC CAACGGCAAA
ACCACGACTA CCCAGCTGCT GGCGCAGTGG AGCCAACTGC TTGGCGAAAC CAGCGCGGTA
ATGGGCACCG TTGGTAACGG TCTGCTTGGG AAAGTGATCC CGACAGAAAA TACTACCGGT
TCCGCAGTCG ATGTTCAGCA TGAGCTGGCG GGGCTGGTGG AGCAGGGCGC GACGTTTTGC
GCAATGGAAG TTTCCTCCCA CGGGCTGGTA CAGCACCGTG TGGCGGCATT GAAATTTGCG
GCGTCGGTCT TTACCAACTT AAGCCGCGAT CACCTTGATT ATCATGGTGA TATGGAACAC
TACGAAGCTG CGAAATGGCT GCTTTATTCT GAACATCATT GCGGTCAGGC GATTATTAAC
GCCGACGATG AAGTGGGCCG CCGCTGGCTG GCAAAACTGC CGGACGCGGT TGCGGTATCA
ATGGAAGATC ATATCAATCC GAACTGTCAC GGACGCTGGT TAAAAGCGAT CGACGTGAAC
TATCACGACA GCGGTGCGAC GATTCGCTTT AGCTCAAGTT GGGGCGATGG CGAAATTGAA
AGCCATCTGA TGGGCGCTTT TAACGTCAGC AACCTGCTGC TCGCGCTGGC GACACTGCTG
GCACTCGGCT ATCCACTGGC TGATCTGCTG AAAACCGCCG CGCGTCTGCA ACCGGTTTGC
GGACGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAT
ACGCCGGATG CACTGGAAAA AGCCTTACAG GCGGCGCGCC TGCACTGTGC GGGCAAGCTG
TGGTGCGTCT TTGGCTGTGG TGGCGATCGC GATAAAGGTA AGCGTCCACT GATGGGCGCA
ATTGCCGAAG AGTTTGCTGA CGTGGCGGTG GTGACGGACG ATAACCCGCG TACCGAAGAA
CCGCGTGCCA TCATCAACGA TATTCTGGCG GGAATGTTAG ATGCCGGACA TGCCAAAGTG
ATGGAAGGCC GTGCTGAAGC GGTGACTTGC GCCGTTATGC AGGCTAAAGA GAATGATGTG
GTACTGGTCG CGGGCAAAGG CCATGAAGAT TACCAGATTG TTGGCAATCA GCGTCTGGAC
TACTCCGATC GCGTCACGGT GGCGCGTCTG CTGGGGGTGA TTGCATGA
 
Protein sequence
MADRNLRDLL APWVPDAPSR ALREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV 
AAIIAEAKDE ATDGEIREMH GVPVIYLSQL NERLSALAGR FYHEPSDNLR LVGVTGTNGK
TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHELA GLVEQGATFC
AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMEH YEAAKWLLYS EHHCGQAIIN
ADDEVGRRWL AKLPDAVAVS MEDHINPNCH GRWLKAIDVN YHDSGATIRF SSSWGDGEIE
SHLMGAFNVS NLLLALATLL ALGYPLADLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH
TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADVAV VTDDNPRTEE
PRAIINDILA GMLDAGHAKV MEGRAEAVTC AVMQAKENDV VLVAGKGHED YQIVGNQRLD
YSDRVTVARL LGVIA