| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_4150 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4499156 |
|---|
| End bp | 4501417 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase |
|---|
| Protein accession | ACX41750 |
|---|
| Protein GI | 260451328 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAT TGAATCACAC CCTCGGTTTC CCTCGCGTTG GCCTGCGTCG CGAGCTGAAA
AAAGCGCAAG AAAGTTATTG GGCGGGGAAC TCCACGCGTG AAGAACTGCT GGCGGTAGGG
CGTGAATTGC GTGCTCGTCA CTGGGATCAA CAAAAGCAAG CGGGTATCGA CCTGCTGCCG
GTGGGCGATT TTGCCTGGTA CGATCATGTA CTGACCACCA GTCTGCTGCT GGGTAACGTT
CCGGCGCGTC ATCAGAACAA AGATGGTTCG GTAGATATCG ACACCCTGTT CCGTATTGGT
CGTGGACGTG CGCCGACTGG CGAACCTGCG GCGGCAGCGG AAATGACCAA ATGGTTTAAC
ACCAACTATC ACTACATGGT GCCGGAGTTC GTTAAAGGCC AACAGTTCAA ACTGACCTGG
ACGCAGCTGC TGGACGAAGT GGACGAGGCG CTGGCGCTGG GCCACAAGGT GAAACCTGTG
CTGCTGGGGC CGGTTACCTG GCTGTGGCTG GGGAAAGTGA AAGGTGAACA ATTTGACCGC
CTGAGCCTGC TGAACGACAT TCTGCCGGTT TATCAGCAAG TGCTGGCAGA ACTGGCGAAA
CGCGGCATCG AGTGGGTACA GATTGATGAA CCCGCGCTGG TACTGGAACT ACCACAGGCG
TGGCTGGACG CATACAAACC CGCTTACGAC GCGCTCCAGG GACAGGTGAA ACTGCTGCTG
ACCACCTATT TTGAAGGCGT AACGCCAAAT CTCGACACGA TTACTGCGCT GCCTGTTCAG
GGTCTGCATG TTGACCTCGT ACATGGTAAA GATGACGTTG CTGAACTGCA CAAGCGCCTG
CCTTCTGACT GGTTGCTGTC TGCGGGTCTG ATCAATGGTC GTAACGTCTG GCGCGCCGAT
CTTACCGAGA AATATGCGCA AATTAAGGAC ATTGTCGGCA AACGTGATTT GTGGGTGGCA
TCTTCCTGCT CGTTGCTGCA CAGCCCCATC GACCTGAGCG TGGAAACGCG TCTTGATGCA
GAAGTGAAAA GCTGGTTTGC CTTCGCCCTA CAAAAATGCC ATGAACTGGC ACTGCTGCGC
GATGCGCTGA ACAGTGGTGA CACGGCAGCT CTGGCAGAGT GGAGCGCCCC GATTCAGGCA
CGTCGTCACT CTACCCGCGT ACATAATCCG GCGGTAGAAA AGCGTCTGGC GGCGATCACC
GCCCAGGACA GCCAGCGTGC GAATGTCTAT GAAGTGCGTG CTGAAGCCCA GCGTGCGCGT
TTTAAACTGC CAGCGTGGCC GACCACCACG ATTGGTTCCT TCCCGCAAAC CACGGAAATT
CGTACCCTGC GTCTGGATTT CAAAAAGGGC AATCTCGACG CCAACAACTA CCGCACGGGC
ATTGCGGAAC ATATCAAGCA GGCCATTGTT GAGCAGGAAC GTTTGGGACT GGATGTGCTG
GTACATGGCG AGGCCGAGCG TAATGACATG GTGGAATACT TTGGCGAGCA CCTCGACGGA
TTTGTCTTTA CGCAAAACGG TTGGGTACAG AGCTACGGTT CCCGCTGCGT GAAGCCACCG
ATTGTCATTG GTGACATTAG CCGCCCGGCA CCGATTACCG TGGAGTGGGC GAAGTATGCG
CAATCGCTGA CCGACAAACC GGTGAAAGGG ATGCTGACGG GGCCGGTGAC CATACTCTGC
TGGTCGTTCC CGCGTGAAGA TGTCAGCCGT GAAACCATCG CCAAACAGAT TGCGCTGGCG
CTGCGTGATG AAGTGGCCGA TCTGGAAGCC GCTGGAATTG GCATCATCCA GATTGACGAA
CCGGCGCTGC GCGAAGGTTT ACCGCTGCGT CGTAGCGACT GGGATGCGTA TCTCCAGTGG
GGCGTAGAGG CCTTCCGTAT CAACGCCGCC GTGGCGAAAG ATGACACACA AATCCACACT
CACATGTGTT ATTGCGAGTT CAACGACATC ATGGATTCGA TTGCGGCGCT GGACGCAGAC
GTCATCACCA TCGAAACCTC GCGTTCCGAC ATGGAGTTGC TGGAGTCGTT TGAAGAGTTT
GATTATCCAA ATGAAATCGG TCCTGGCGTC TATGACATTC ACTCGCCAAA CGTACCGAGC
GTGGAATGGA TTGAAGCCTT GCTGAAGAAA GCGGCAAAAC GCATTCCGGC AGAGCGCCTG
TGGGTCAACC CGGACTGTGG CCTGAAAACG CGCGGCTGGC CAGAAACCCG CGCGGCACTG
GCGAACATGG TGCAGGCGGC GCAGAACTTG CGTCGGGGGT AA
|
|---|
| Protein sequence | MTILNHTLGF PRVGLRRELK KAQESYWAGN STREELLAVG RELRARHWDQ QKQAGIDLLP
VGDFAWYDHV LTTSLLLGNV PARHQNKDGS VDIDTLFRIG RGRAPTGEPA AAAEMTKWFN
TNYHYMVPEF VKGQQFKLTW TQLLDEVDEA LALGHKVKPV LLGPVTWLWL GKVKGEQFDR
LSLLNDILPV YQQVLAELAK RGIEWVQIDE PALVLELPQA WLDAYKPAYD ALQGQVKLLL
TTYFEGVTPN LDTITALPVQ GLHVDLVHGK DDVAELHKRL PSDWLLSAGL INGRNVWRAD
LTEKYAQIKD IVGKRDLWVA SSCSLLHSPI DLSVETRLDA EVKSWFAFAL QKCHELALLR
DALNSGDTAA LAEWSAPIQA RRHSTRVHNP AVEKRLAAIT AQDSQRANVY EVRAEAQRAR
FKLPAWPTTT IGSFPQTTEI RTLRLDFKKG NLDANNYRTG IAEHIKQAIV EQERLGLDVL
VHGEAERNDM VEYFGEHLDG FVFTQNGWVQ SYGSRCVKPP IVIGDISRPA PITVEWAKYA
QSLTDKPVKG MLTGPVTILC WSFPREDVSR ETIAKQIALA LRDEVADLEA AGIGIIQIDE
PALREGLPLR RSDWDAYLQW GVEAFRINAA VAKDDTQIHT HMCYCEFNDI MDSIAALDAD
VITIETSRSD MELLESFEEF DYPNEIGPGV YDIHSPNVPS VEWIEALLKK AAKRIPAERL
WVNPDCGLKT RGWPETRAAL ANMVQAAQNL RRG
|
|---|
| |