Gene EcDH1_4107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4107 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4444069 
End bp4444995 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID 
ProductAldose 1-epimerase 
Protein accessionACX41707 
Protein GI260451285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTAA TTAAGGTGCC TTGTATGCAA ATCACCAATA TGCATTGCAG TGGACAGACC 
GTTTCACTTG CCGCGGGGGA TTATCACGCG ACCATTGTGA CCGTCGGTGC TGGTCTGGCT
GAATTAACCT TTCAGGGTTG TCATTTAGTC ATCCCGCACA AACCCGAAGA GATGCCGCTG
GCGCATCTGG GTAAAGTGCT TATTCCGTGG CCGAACCGGA TCGCCAACGG CTGTTACCGC
TATCAGGGGC AGGAATATCA GTTACCCATT AATGAACATA GTTCAAAAGC CGCTATTCAC
GGGCTGCTTG CCTGGCGAGA CTGGCAAATT AGTGAATTAA CCGCCACCAG CGTTACCCTG
ACAGCTTTTC TGCCGCCCAG TTACGGCTAT CCGTTTATGC TGGCTTCACA AGTTGTTTAT
TCGCTCAACG CACACACGGG TCTTTCCGTT GAGATCGCAA GCCAGAATAT CGGCACTGTC
GCAGCGCCTT ATGGCGTGGG TATTCATCCT TATTTAACCT GCAACTTAAC ATCTGTTGAT
GAATATCTGT TCCAGCTTCC GGCAAACCAG GTTTATGCCG TCGATGAGCA CGCGAATCCG
ACAACGCTTC ACCACGTTGA TGAGCTGGAT TTAAATTTCA CGCAGGCGAA AAAAATAGCC
GCGACAAAAA TCGACCACAC CTTTAAAACC GCTAATGATT TGTGGGAAAT GACCATTACC
CATCCACAGC AGGCGCTTTC GGTAAGCCTT TGTTCCGATC AACTCTGGGT GCAGGTTTAT
AGCGGTGAAA AATTACAGCG TCAGGGACTG GCAGTTGAAC CTATGAGTTG CCCGCCTAAC
GCCTTTAATT CAGGTATCGA CTTATTATTA CTGGAATCAG GAAAACCGCA CCGCCTGTTT
TTTAATATTT ACGGACAGAG AAAATAA
 
Protein sequence
MSLIKVPCMQ ITNMHCSGQT VSLAAGDYHA TIVTVGAGLA ELTFQGCHLV IPHKPEEMPL 
AHLGKVLIPW PNRIANGCYR YQGQEYQLPI NEHSSKAAIH GLLAWRDWQI SELTATSVTL
TAFLPPSYGY PFMLASQVVY SLNAHTGLSV EIASQNIGTV AAPYGVGIHP YLTCNLTSVD
EYLFQLPANQ VYAVDEHANP TTLHHVDELD LNFTQAKKIA ATKIDHTFKT ANDLWEMTIT
HPQQALSVSL CSDQLWVQVY SGEKLQRQGL AVEPMSCPPN AFNSGIDLLL LESGKPHRLF
FNIYGQRK