Gene EcDH1_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3954 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4261467 
End bp4261964 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content53% 
IMG OID 
ProductChorismate lyase 
Protein accessionACX41554 
Protein GI260451132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACACC CCGCGTTAAC GCAACTGCGT GCGCTGCGCT ATTGTAAAGA GATCCCTGCC 
CTGGATCCGC AACTGCTCGA CTGGCTGTTG CTGGAGGATT CCATGACAAA ACGTTTTGAA
CAGCAGGGAA AAACGGTAAG CGTGACGATG ATCCGCGAAG GGTTTGTCGA GCAGAATGAA
ATCCCCGAAG AACTGCCGCT GCTGCCGAAA GAGTCTCGTT ACTGGTTACG TGAAATTTTG
TTATGTGCCG ATGGTGAACC GTGGCTTGCC GGTCGTACCG TCGTTCCTGT GTCAACGTTA
AGCGGGCCGG AGCTGGCGTT ACAAAAATTG GGTAAAACGC CGTTAGGACG CTATCTGTTC
ACATCATCGA CATTAACCCG GGACTTTATT GAGATAGGCC GTGATGCCGG GCTGTGGGGG
CGACGTTCCC GCCTGCGATT AAGCGGTAAA CCGCTGTTGC TAACAGAACT GTTTTTACCG
GCGTCACCGT TGTACTAA
 
Protein sequence
MSHPALTQLR ALRYCKEIPA LDPQLLDWLL LEDSMTKRFE QQGKTVSVTM IREGFVEQNE 
IPEELPLLPK ESRYWLREIL LCADGEPWLA GRTVVPVSTL SGPELALQKL GKTPLGRYLF
TSSTLTRDFI EIGRDAGLWG RRSRLRLSGK PLLLTELFLP ASPLY