Gene EcDH1_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3944 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4251764 
End bp4252801 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content54% 
IMG OID 
ProductTIM-barrel protein, yjbN family 
Protein accessionACX41544 
Protein GI260451122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGTA ATTCTGAAAT GCAAAAAATC AACCAAACCA GCGCAATGCC TGAAAAAACT 
GACGTTCACT GGAGTGGTCG GTTTAGCGTT GCACCAATGC TCGACTGGAC GGACAGACAT
TGCCGCTATT TCTTGCGTCT GCTTTCCCGC AATACGTTGC TGTATACCGA AATGGTGACC
ACAGGGGCGA TTATTCACGG TAAAGGTGAT TATCTGGCGT ACAGTGAAGA AGAACATCCG
GTAGCGTTGC AACTGGGCGG TAGCGATCCG GCGGCGCTGG CGCAGTGTGC AAAGCTGGCA
GAAGCGCGCG GATATGATGA GATCAACCTG AATGTCGGCT GCCCGTCTGA CCGGGTGCAG
AACGGCATGT TTGGTGCGTG TCTGATGGGT AATGCGCAGC TGGTTGCCGA CTGCGTGAAA
GCGATGCGCG ATGTGGTGTC GATTCCGGTG ACGGTGAAAA CGCGTATTGG CATCGACGAC
CAGGACAGCT ATGAATTTCT CTGCGATTTC ATCAATACCG TTTCCGGCAA AGGCGAGTGT
GAGATGTTCA TCATCCACGC ACGTAAAGCC TGGCTTTCGG GGTTAAGCCC GAAAGAAAAC
CGTGAAATCC CGCCGCTCGA TTATCCGCGT GTGTATCAAC TGAAGCGTGA CTTTCCGCAT
CTGACAATGT CGATTAACGG TGGTATCAAG TCGCTGGAAG AGGCCAAAGC ACACCTGCAA
CATATGGATG GCGTGATGGT CGGGCGCGAG GCGTATCAGA ATCCGGGTAT TCTGGCGGCG
GTAGACCGGG AGATCTTTGG TTCCTCGGAT ACCGATGCCG ATCCGGTGGC GGTAGTGCGC
GCCATGTATC CGTACATTGA GCGTGAACTC AGCCAGGGGA CGTATCTCGG CCATATTACC
CGGCATATGT TGGGCTTGTT CCAGGGTATT CCTGGCGCGC GGCAGTGGCG GCGTTATTTA
AGTGAAAATG CCCATAAAGC GGGTGCAGAC ATTAATGTGC TGGAACACGC GCTCAAACTG
GTGGCGGATA AGCGTTAA
 
Protein sequence
MHGNSEMQKI NQTSAMPEKT DVHWSGRFSV APMLDWTDRH CRYFLRLLSR NTLLYTEMVT 
TGAIIHGKGD YLAYSEEEHP VALQLGGSDP AALAQCAKLA EARGYDEINL NVGCPSDRVQ
NGMFGACLMG NAQLVADCVK AMRDVVSIPV TVKTRIGIDD QDSYEFLCDF INTVSGKGEC
EMFIIHARKA WLSGLSPKEN REIPPLDYPR VYQLKRDFPH LTMSINGGIK SLEEAKAHLQ
HMDGVMVGRE AYQNPGILAA VDREIFGSSD TDADPVAVVR AMYPYIEREL SQGTYLGHIT
RHMLGLFQGI PGARQWRRYL SENAHKAGAD INVLEHALKL VADKR