Gene EcDH1_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3930 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4237087 
End bp4237410 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content51% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionACX41530 
Protein GI260451108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATC AGAAAATTAT TCAGGATCTT ATCGCATGGA TTGACGAGCA TATTGACCAG 
CCGCTTAACA TTGATGTAGT CGCAAAAAAA TCAGGCTATT CAAAGTGGTA CTTGCAACGA
ATGTTCCGCA CGGTGACGCA TCAGACGCTT GGCGATTACA TTCGCCAACG CCGCCTGTTA
CTGGCCGCCG TTGAGTTGCG CACCACCGAG CGTCCGATTT TTGATATCGC AATGGACCTG
GGTTATGTCT CGCAGCAGAC CTTCTCCCGC GTTTTCCGTC GGCAGTTTGA TCGCACTCCC
AGCGATTATC GCCACCGCCT GTAA
 
Protein sequence
MSHQKIIQDL IAWIDEHIDQ PLNIDVVAKK SGYSKWYLQR MFRTVTHQTL GDYIRQRRLL 
LAAVELRTTE RPIFDIAMDL GYVSQQTFSR VFRRQFDRTP SDYRHRL